About   Help   FAQ
Nlrp4d Pseudogene Detail
Summary
  • Symbol
    Nlrp4d
  • Name
    NLR family, pyrin domain containing 4D
  • Synonyms
    Nalp4d, Nalp-beta
  • Feature Type
    pseudogene
  • IDs
    MGI:3056574
    NCBI Gene: 384752
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:10092800-10122862 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 6.39 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    801 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3056574
 pseudogene Chr7:10091688-10122919 (-)
129S1/SvImJ MGP_129S1SvImJ_G0040502
 pseudogene Chr7:7611538-7642796 (-)
A/J MGP_AJ_G0040487
 pseudogene Chr7:7445742-7478211 (-)
AKR/J MGP_AKRJ_G0040412
 pseudogene Chr7:7714420-7753357 (-)
BALB/cJ MGP_BALBcJ_G0040489
 pseudogene Chr7:7578272-7616105 (-)
C3H/HeJ MGP_C3HHeJ_G0040113
 pseudogene Chr7:7613410-7643607 (-)
C57BL/6NJ MGP_C57BL6NJ_G0041116
 pseudogene Chr7:8038678-8074308 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0039174
 pseudogene Chr7:5620272-5655135 (-)
CBA/J MGP_CBAJ_G0040082
 pseudogene Chr7:8138080-8180287 (-)
DBA/2J MGP_DBA2J_G0040287
 pseudogene Chr7:7378053-7412860 (-)
FVB/NJ MGP_FVBNJ_G0040235
 pseudogene Chr7:7385158-7419428 (-)
LP/J MGP_LPJ_G0040330
 pseudogene Chr7:7672390-7704140 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0040226
 pseudogene Chr7:8114075-8173767 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0041191
 pseudogene Chr7:7439630-7471490 (-)
PWK/PhJ MGP_PWKPhJ_G0038853
 pseudogene Chr7:5980096-6011548 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0039417
 pseudogene Chr7:7578607-7610976 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034122 Ensembl Gene Model | MGI Sequence Detail 30063 C57BL/6J ±  kb
transcript ENSMUST00000182420 Ensembl | MGI Sequence Detail 2946 Not Applicable  
polypeptide Q66X24 UniProt | EBI | MGI Sequence Detail 934 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR004020 DAPIN domain
    IPR011029 Death-like domain superfamily
    IPR001611 Leucine-rich repeat
    IPR032675 Leucine-rich repeat domain superfamily
    IPR041267 NACHT, LRR and PYD domains-containing protein, helical domain HD2
    IPR007111 NACHT nucleoside triphosphatase
    IPR050637 NLRP family, innate immunity and inflammation regulators
    IPR041075 NOD2, winged helix domain
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 8
  • Earliest
    J:93248 Hamatani T, et al., Age-associated alteration of gene expression patterns in mouse oocytes. Hum Mol Genet. 2004 Nov 1;13(19):2263-78
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory