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Raxos1 Gene Detail
Summary
  • Symbol
    Raxos1
  • Name
    retina and anterior neural fold homeobox, opposite strand 1
Location &
Maps
more
  • Sequence Map
    Chr18:66070609-66073518 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 39.04 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    162 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3583306
 antisense lncRNA gene Chr18:66070609-66073518 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005797
 lincRNA gene Chr18:66126351-66129260 (+)
A/J MGP_AJ_G0005786
 lincRNA gene Chr18:63236183-63239093 (+)
AKR/J MGP_AKRJ_G0005763
 lincRNA gene Chr18:65022468-65025378 (+)
BALB/cJ MGP_BALBcJ_G0005765
 lincRNA gene Chr18:63378401-63381311 (+)
C3H/HeJ MGP_C3HHeJ_G0005713
 lincRNA gene Chr18:65235819-65238728 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005926
 lincRNA gene Chr18:67877838-67880747 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005269
 lincRNA gene Chr18:62678871-62681801 (+)
CAST/EiJ MGP_CASTEiJ_G0005654
 lincRNA gene Chr18:65235910-65238823 (+)
CBA/J MGP_CBAJ_G0005700
 lincRNA gene Chr18:70124165-70127074 (+)
DBA/2J MGP_DBA2J_G0005718
 lincRNA gene Chr18:62905168-62908077 (+)
FVB/NJ MGP_FVBNJ_G0005745
 lincRNA gene Chr18:62281680-62284589 (+)
LP/J MGP_LPJ_G0005799
 lincRNA gene Chr18:65972438-65975347 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005731
 lincRNA gene Chr18:71514095-71517004 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005924
 lincRNA gene Chr18:65237299-65240208 (+)
PWK/PhJ MGP_PWKPhJ_G0005599
 lincRNA gene Chr18:63158430-63161338 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005515
 lincRNA gene Chr18:65396487-65399411 (+)
WSB/EiJ MGP_WSBEiJ_G0005706
 lincRNA gene Chr18:65101100-65104009 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    715
  • Tissues
    8
  • cDNA Data
    4
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    23
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097907 Ensembl Gene Model | MGI Sequence Detail 2910 C57BL/6J ±  kb
transcript ENSMUST00000181100 Ensembl | MGI Sequence Detail 2547 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 4
    Primer pair 2
References
more
  • Summaries
    All 9
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:98077 Alfano G, et al., Natural antisense transcripts associated with genes involved in eye development. Hum Mol Genet. 2005 Apr 1;14(7):913-23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory