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Cfap92 Gene Detail
Summary
  • Symbol
    Cfap92
  • Name
    cilia and flagella associated protein 92
  • Synonyms
    1810020O05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3586838
    NCBI Gene: 613264
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:87652572-87699783 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 38.75 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1383 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3586838
 protein coding gene Chr6:87652572-87709717 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007011
 lincRNA gene Chr6:89035588-89050570 (-)
A/J MGP_AJ_G0007007
 lincRNA gene Chr6:85596078-85611895 (-)
AKR/J MGP_AKRJ_G0006975
 lincRNA gene Chr6:88075176-88090200 (-)
BALB/cJ MGP_BALBcJ_G0006983
 lincRNA gene Chr6:85594120-85609209 (-)
C3H/HeJ MGP_C3HHeJ_G0006942
 lincRNA gene Chr6:96382157-96397075 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007147
 lincRNA gene Chr6:91417865-91432774 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006383
 lincRNA gene Chr6:83774568-83787125 (-)
CAST/EiJ MGP_CASTEiJ_G0006840
 lincRNA gene Chr6:88153416-88169711 (-)
CBA/J MGP_CBAJ_G0006908
 lincRNA gene Chr6:94957727-94978454 (-)
DBA/2J MGP_DBA2J_G0006928
 lincRNA gene Chr6:84898891-84914033 (-)
FVB/NJ MGP_FVBNJ_G0006952
 lincRNA gene Chr6:84084774-84099611 (-)
LP/J MGP_LPJ_G0007014
 lincRNA gene Chr6:89054807-89070811 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006932
 lincRNA gene Chr6:99100617-99116689 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007152
 lincRNA gene Chr6:87920964-87938437 (-)
PWK/PhJ MGP_PWKPhJ_G0006779
 lincRNA gene Chr6:83863964-83879198 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006689
 lincRNA gene Chr6:86741010-86756511 (-)
WSB/EiJ MGP_WSBEiJ_G0006897
 lincRNA gene Chr6:88379090-88397058 (-)



Homology
more
  • Human Ortholog
    CFAP92, cilia and flagella associated protein 92 (putative)
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CFAP92, cilia and flagella associated protein 92 (putative)
  • Synonyms
    FAP92, KIAA1257
  • Links
    NCBI Gene ID: 57501
    neXtProt AC: NX_Q9ULG3
    UniProt: Q6ZUG5, Q9ULG3

  • Chr Location
    3q21.3; chr3:128909866-129026748 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    713
  • Tissues
    7
  • cDNA Data
    3
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    49
  • RefSeq
    20
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000089997 Ensembl Gene Model | MGI Sequence Detail 47212 C57BL/6J ±  kb
transcript ENSMUST00000238521 Ensembl | MGI Sequence Detail 3678 Not Applicable  
polypeptide ENSMUSP00000158817 Ensembl | MGI Sequence Detail 1158 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027876 Domain of unknown function DUF4550
Molecular
Reagents
less
  • All nucleic 4
    cDNA 3
    Primer pair 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:7384678
References
more
  • Summaries
    All 16
    Developmental Gene Expression 1
    Phenotypes 4
  • Earliest
    J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
  • Latest
    J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory