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Cdh19 Gene Detail
Summary
  • Symbol
    Cdh19
  • Name
    cadherin 19, type 2
  • Feature Type
    protein coding gene
  • IDs
    MGI:3588198
    NCBI Gene: 227485
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:110816056-110905314 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 50.78 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2791 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3588198
 protein coding gene Chr1:110811802-110905331 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016386
 protein coding gene Chr1:113176078-113279369 (-)
A/J MGP_AJ_G0016366
 protein coding gene Chr1:109204531-109289135 (-)
AKR/J MGP_AKRJ_G0016330
 protein coding gene Chr1:112295511-112384016 (-)
BALB/cJ MGP_BALBcJ_G0016326
 protein coding gene Chr1:109359253-109453715 (-)
C3H/HeJ MGP_C3HHeJ_G0016153
 protein coding gene Chr1:112713123-112808810 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016785
 protein coding gene Chr1:117533887-117636479 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014503
 protein coding gene Chr1:103157403-103231442 (-)
CAST/EiJ MGP_CASTEiJ_G0015736
 protein coding gene Chr1:111640424-111738464 (-)
CBA/J MGP_CBAJ_G0016125
 protein coding gene Chr1:121547218-121646824 (-)
DBA/2J MGP_DBA2J_G0016232
 protein coding gene Chr1:108294936-108385161 (-)
FVB/NJ MGP_FVBNJ_G0016231
 protein coding gene Chr1:107153481-107249491 (-)
LP/J MGP_LPJ_G0016305
 protein coding gene Chr1:114537473-114626498 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016258
 protein coding gene Chr1:126848712-126975931 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016823
 protein coding gene Chr1:112287854-112395471 (-)
PWK/PhJ MGP_PWKPhJ_G0015521
 protein coding gene Chr1:107332169-107424863 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015309
 protein coding gene Chr1:110888737-110988728 (-)
WSB/EiJ MGP_WSBEiJ_G0015798
 protein coding gene Chr1:112134870-112229105 (-)



Homology
more
  • Human Ortholog
    CDH19, cadherin 19
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CDH19, cadherin 19
  • Synonyms
    CDH7, CDH7L2
  • Links
    NCBI Gene ID: 28513
    neXtProt AC: NX_Q9H159
    UniProt: Q9H159

  • Chr Location
    18q22.1; chr18:66501083-66604138 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    14 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    885
  • Tissues
    157
  • cDNA Data
    10
  • Literature Summary
    6
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000047216 Ensembl Gene Model | MGI Sequence Detail 89259 C57BL/6J ±  kb
transcript ENSMUST00000094626 Ensembl | MGI Sequence Detail 3914 Not Applicable  
polypeptide ENSMUSP00000092210 Ensembl | MGI Sequence Detail 770 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 10
    Primer pair 4
    Other 1

    Microarray probesets 1
References
more
  • Summaries
    All 33
    Developmental Gene Expression 6
    Gene Ontology 1
    Phenotypes 14
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory