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9530082P21Rik Gene Detail
Summary
  • Symbol
    9530082P21Rik
  • Name
    RIKEN cDNA 9530082P21 gene
  • Synonyms
    E030034P13Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3603340
    NCBI Gene: 638247
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:23968210-23973039 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 12.03 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    201 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3603340
 lncRNA gene Chr17:23962208-23973039 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005700
 lincRNA gene Chr17:22660176-22671024 (+)
A/J MGP_AJ_G0005689
 lincRNA gene Chr17:22004804-22015645 (+)
AKR/J MGP_AKRJ_G0005668
 lincRNA gene Chr17:22085509-22096432 (+)
BALB/cJ MGP_BALBcJ_G0005669
 lincRNA gene Chr17:22222253-22233310 (+)
C3H/HeJ MGP_C3HHeJ_G0005616
 lincRNA gene Chr17:22444349-22455271 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005827
 lincRNA gene Chr17:23648479-23659310 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005180
 lincRNA gene Chr17:19571362-19582196 (+)
CAST/EiJ MGP_CASTEiJ_G0005558
 lincRNA gene Chr17:22276163-22289298 (+)
CBA/J MGP_CBAJ_G0005604
 lincRNA gene Chr17:24455921-24469531 (+)
DBA/2J MGP_DBA2J_G0005622
 lincRNA gene Chr17:21635520-21646417 (+)
FVB/NJ MGP_FVBNJ_G0005648
 lincRNA gene Chr17:21361144-21372808 (+)
LP/J MGP_LPJ_G0005703
 lincRNA gene Chr17:22911399-22923634 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005633
 lincRNA gene Chr17:24214216-24225470 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005827
 lincRNA gene Chr17:22382006-22394286 (+)
PWK/PhJ MGP_PWKPhJ_G0005504
 lincRNA gene Chr17:20422166-20433115 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005423
 lincRNA gene Chr17:20399427-20410291 (+)
WSB/EiJ MGP_WSBEiJ_G0005610
 lincRNA gene Chr17:22431967-22443930 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    30
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 638247 NCBI Gene Model | MGI Sequence Detail 4830 C57BL/6J ±  kb
transcript NR_015472 RefSeq | MGI Sequence Detail 3162 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 9
  • Earliest
    J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
  • Latest
    J:144087 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform. Database Download. 2009;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory