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5730409E04Rik Gene Detail
Summary
  • Symbol
    5730409E04Rik
  • Name
    RIKEN cDNA 5730409E04Rik gene
  • Synonyms
    7530403E16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3609248
    NCBI Gene: 230757
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:126503638-126508164 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 60.90 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    285 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3609248
 protein coding gene Chr4:126503611-126508164 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028784
 protein coding gene Chr4:128311642-128316073 (+)
A/J MGP_AJ_G0028743
 protein coding gene Chr4:123256799-123261236 (+)
AKR/J MGP_AKRJ_G0028696
 protein coding gene Chr4:126641158-126646006 (+)
BALB/cJ MGP_BALBcJ_G0028766
 protein coding gene Chr4:123826528-123833646 (+)
C3H/HeJ MGP_C3HHeJ_G0028480
 protein coding gene Chr4:126711697-126716112 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029208
 protein coding gene Chr4:133199151-133203577 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026481
 protein coding gene Chr4:116383446-116388165 (+)
CAST/EiJ MGP_CASTEiJ_G0027913
 protein coding gene Chr4:124821427-124825857 (+)
CBA/J MGP_CBAJ_G0028446
 protein coding gene Chr4:136414135-136419157 (+)
DBA/2J MGP_DBA2J_G0028595
 protein coding gene Chr4:123701612-123706443 (+)
FVB/NJ MGP_FVBNJ_G0028562
 protein coding gene Chr4:122357376-122362308 (+)
LP/J MGP_LPJ_G0028696
 protein coding gene Chr4:128588449-128594670 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028588
 protein coding gene Chr4:141438760-141443469 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029246
 protein coding gene Chr4:127001435-127007509 (+)
PWK/PhJ MGP_PWKPhJ_G0027634
 protein coding gene Chr4:120196130-120201351 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027460
 protein coding gene Chr4:122832302-122838012 (+)
WSB/EiJ MGP_WSBEiJ_G0027993
 protein coding gene Chr4:127114098-127120092 (+)



Homology
more
  • Human Ortholog
    C1orf216, chromosome 1 open reading frame 216
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C1orf216, chromosome 1 open reading frame 216
  • Links
    NCBI Gene ID: 127703
    neXtProt AC: NX_Q8TAB5
    UniProt: Q8TAB5

  • Chr Location
    1p34.3; chr1:35713877-35718894 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving 5730409E04Rik
  • Find Mice (IMSR)
    4 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    733
  • Tissues
    4
  • cDNA Data
    19
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 230757 NCBI Gene Model | MGI Sequence Detail 4527 C57BL/6J ±  kb
transcript NM_001145950 RefSeq | MGI Sequence Detail 2864 C57BL/6  
polypeptide Q8BP99 UniProt | EBI | MGI Sequence Detail 230 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 19
    cDNA 19

    Microarray probesets 3
Other
Accession IDs
less
MGI:2140382
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Phenotypes 6
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory