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Nckap5l Gene Detail
Summary
  • Symbol
    Nckap5l
  • Name
    NCK-associated protein 5-like
  • Synonyms
    C230021P08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3609653
    NCBI Gene: 380969
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:99319916-99355629 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 56.13 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    918 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3609653
 protein coding gene Chr15:99319915-99355676 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022331
 protein coding gene Chr15:101265323-101303905 (-)
A/J MGP_AJ_G0022289
 protein coding gene Chr15:97231787-97267394 (-)
AKR/J MGP_AKRJ_G0022265
 protein coding gene Chr15:100228660-100265973 (-)
BALB/cJ MGP_BALBcJ_G0022295
 protein coding gene Chr15:97420941-97456939 (-)
C3H/HeJ MGP_C3HHeJ_G0022063
 protein coding gene Chr15:100291535-100328205 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022740
 protein coding gene Chr15:105035629-105076993 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020266
 protein coding gene Chr15:93127084-93163577 (-)
CAST/EiJ MGP_CASTEiJ_G0021587
 protein coding gene Chr15:101152191-101193134 (-)
CBA/J MGP_CBAJ_G0022032
 protein coding gene Chr15:108603212-108645662 (-)
DBA/2J MGP_DBA2J_G0022159
 protein coding gene Chr15:96671026-96707289 (-)
FVB/NJ MGP_FVBNJ_G0022139
 protein coding gene Chr15:95661527-95697348 (-)
LP/J MGP_LPJ_G0022230
 protein coding gene Chr15:101408729-101447594 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022159
 protein coding gene Chr15:112527862-112565759 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022755
 protein coding gene Chr15:100321632-100359695 (-)
PWK/PhJ MGP_PWKPhJ_G0021326
 protein coding gene Chr15:96806282-96843450 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021161
 protein coding gene Chr15:100177074-100221306 (-)
WSB/EiJ MGP_WSBEiJ_G0021638
 protein coding gene Chr15:100854236-100892418 (-)



Homology
more
  • Human Ortholog
    NCKAP5L, NCK associated protein 5 like
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    NCKAP5L, NCK associated protein 5 like
  • Synonyms
    Cep169, FP1193, KIAA1602
  • Links
    NCBI Gene ID: 57701
    neXtProt AC: NX_Q9HCH0
    UniProt: Q9HCH0

  • Chr Location
    12q13.12; chr12:49791146-49828750 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    25 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    4
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    737
  • Tissues
    31
  • cDNA Data
    28
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000023009 Ensembl Gene Model | MGI Sequence Detail 35714 C57BL/6J ±  kb
transcript ENSMUST00000023747 Ensembl | MGI Sequence Detail 4853 Not Applicable  
polypeptide ENSMUSP00000023747 Ensembl | MGI Sequence Detail 1323 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 28
    cDNA 28

    Microarray probesets 2
References
more
  • Summaries
    All 46
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 4
    Phenotypes 25
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory