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Vmn1r90 Gene Detail
Summary
  • Symbol
    Vmn1r90
  • Name
    vomeronasal 1 receptor 90
  • Synonyms
    B430211C08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3612342
    NCBI Gene: 627280
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:14295167-14296096 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 8.23 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    98 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3612342
 protein coding gene Chr7:14289399-14297431 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031685
 protein coding gene Chr7:12130905-12132568 (-)
A/J MGP_AJ_G0031659
 protein coding gene Chr7:11849181-11850844 (-)
AKR/J MGP_AKRJ_G0031709
 protein coding gene Chr7:21713233-21715018 (-)
BALB/cJ MGP_BALBcJ_G0031664
 protein coding gene Chr7:12010352-12012015 (-)
C3H/HeJ MGP_C3HHeJ_G0031385
 protein coding gene Chr7:12329772-12331435 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032128
 protein coding gene Chr7:12693564-12696578 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0030740
 protein coding gene Chr7:9533818-9535482 (-)
CBA/J MGP_CBAJ_G0031343
 protein coding gene Chr7:12982539-12985916 (-)
DBA/2J MGP_DBA2J_G0031501
 protein coding gene Chr7:11780520-11782183 (-)
FVB/NJ MGP_FVBNJ_G0031457
 protein coding gene Chr7:11725908-11727571 (-)
LP/J MGP_LPJ_G0031587
 protein coding gene Chr7:12209601-12212038 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031492
 protein coding gene Chr7:13182311-13185510 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032158
 protein coding gene Chr7:11914907-11921921 (-)
PWK/PhJ MGP_PWKPhJ_G0030464
 protein coding gene Chr7:9958097-9960112 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030292
 protein coding gene Chr7:7635588-7637252 (-)
WSB/EiJ MGP_WSBEiJ_G0030954
 protein coding gene Chr7:21578280-21579774 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 627280 NCBI Gene Model | MGI Sequence Detail 930 C57BL/6J ±  kb
transcript NM_001244031 RefSeq | MGI Sequence Detail 930 C57BL/6  
polypeptide NP_001230960 RefSeq | MGI Sequence Detail 309 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR001611 Leucine-rich repeat
    IPR032675 Leucine-rich repeat domain superfamily
    IPR050637 NLRP family, innate immunity and inflammation regulators
    IPR004072 Vomeronasal receptor, type 1
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 13
    Phenotypes 1
  • Earliest
    J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;20(1):10-18
  • Latest
    J:340071 Ji S, et al., OBOX regulates mouse zygotic genome activation and early development. Nature. 2023 Aug;620(7976):1047-1053
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory