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Rbm8a2 Gene Detail
Summary
  • Symbol
    Rbm8a2
  • Name
    RNA binding motif protein 8A2
  • Synonyms
    B020018G12Rik, Y14
Location &
Maps
more
  • Sequence Map
    Chr1:175805784-175806509 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 81.90 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    186 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3612447
 protein coding gene Chr1:175805343-175806680 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016844
 protein coding gene Chr1:182085525-182088242 (-)
A/J MGP_AJ_G0016823
 protein coding gene Chr1:174748355-174749692 (-)
AKR/J MGP_AKRJ_G0016789
 protein coding gene Chr1:179988761-179990098 (-)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0016606
 protein coding gene Chr1:180575391-180579503 (-)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0014951
 protein coding gene Chr1:166065656-166067001 (-)
CAST/EiJ MGP_CASTEiJ_G0016187
 protein coding gene Chr1:179950832-179951899 (-)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0016685
 protein coding gene Chr1:173605558-173607861 (-)
FVB/NJ MGP_FVBNJ_G0016682
 protein coding gene Chr1:171723181-171724258 (-)
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0017281
 protein coding gene Chr1:179734393-179736980 (-)
PWK/PhJ MGP_PWKPhJ_G0015974
 protein coding gene Chr1:172699051-172700509 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015751
 protein coding gene Chr1:178772542-178774735 (-)
WSB/EiJ MGP_WSBEiJ_G0016249
 protein coding gene Chr1:179941373-179943504 (-)



Homology
more
  • Human Ortholog
    RBM8A, RNA binding motif protein 8A
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RBM8A, RNA binding motif protein 8A
  • Synonyms
    BOV-1A, BOV-1B, BOV-1C, C1DELq21.1, DEL1q21.1, MDS014, RBM8, RBM8B, TAR, Y14, ZNRP, ZRNP1
  • Links
    NCBI Gene ID: 9939
    neXtProt AC: NX_Q9Y5S9
    UniProt: Q9Y5S9

  • Chr Location
    1q21.1; chr1:145921556-145927678 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with human RBM8A associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    16
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    732
  • Tissues
    13
  • cDNA Data
    6
  • Literature Summary
    1
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 545388 NCBI Gene Model | MGI Sequence Detail 726 C57BL/6J ±  kb
transcript AK139805 GenBank | ENA | DDBJ | MGI Sequence Detail 1341 C57BL/6J  
polypeptide A0A0N4SUH6 UniProt | EBI | MGI Sequence Detail 174 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 7
    cDNA 6
    Primer pair 1

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 2
  • Earliest
    J:104317 Islam S, et al., Developmental and regional expression and localization of mRNAs encoding proteins involved in RNA translocation. J Histochem Cytochem. 2005 Dec;53(12):1501-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory