4930526A20Rik Pseudogene Detail

Summary

• Symbol
  4930526A20Rik
• Name
  RIKEN cDNA 4930526A20 gene

• Feature Type
  pseudogene
• IDs
  MGI:3612449
  NCBI Gene: 622485
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:28294380-28295329 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 14.62 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  32 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3612449	pseudogene	Chr17:28294084-28295376 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039680	pseudogene	Chr17:27422789-27424944 (-)
A/J	MGP_AJ_G0039677	pseudogene	Chr17:26554831-26556430 (-)
AKR/J	MGP_AKRJ_G0039604	pseudogene	Chr17:26723966-26725565 (-)
BALB/cJ	MGP_BALBcJ_G0039649	pseudogene	Chr17:26816115-26818004 (-)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0040208	pseudogene	Chr17:28547047-28549996 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036902	pseudogene	Chr7:466985-472568 (+)
CAST/EiJ	MGP_CASTEiJ_G0038432	pseudogene	Chr17:27083110-27084569 (-)
CBA/J	MGP_CBAJ_G0039283	pseudogene	Chr17:29547916-29550202 (-)
DBA/2J	MGP_DBA2J_G0039477	pseudogene	Chr17:26104046-26105925 (-)
FVB/NJ	MGP_FVBNJ_G0039432	pseudogene	Chr17:25898490-25900306 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0039436	pseudogene	Chr17:29006297-29012158 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040311	pseudogene	Chr17:27144984-27148207 (-)
PWK/PhJ	MGP_PWKPhJ_G0038108	pseudogene	Chr17:24906093-24908058 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037916	pseudogene	Chr7:635796-641805 (+)
WSB/EiJ	MGP_WSBEiJ_G0038666	pseudogene	Chr17:27139108-27141772 (-)

Homology

• Gene Tree
  4930526A20Rik
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000085521 (Evidence)
• NCBI Gene
  622485

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085521	Ensembl Gene Model | MGI Sequence Detail	950	C57BL/6J
transcript	ENSMUST00000134228	Ensembl | MGI Sequence Detail	950	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;