Hbq1b MGI Mouse Gene Detail - MGI:3613460

Symbol

Hbq1b
Name

hemoglobin, theta 1B
Synonyms

F830116E18Rik, HBQ-T1

Feature Type

protein coding gene
IDs

MGI:3613460
NCBI Gene: 544763
Alliance

gene page
Transcription Start Sites

2 TSS

Sequence Map

Chr11:32236965-32237784 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 11, 18.86 cM
Mapping Data

2 experiments

SNPs within 2kb

156 from dbSNP Build 142
Strain Annotations

13

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3613460	protein coding gene	Chr11:32236964-32237912 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0018106	protein coding gene	Chr11:29334180-29339854 (+)
AKR/J	MGP_AKRJ_G0018070	protein coding gene	Chr11:30267692-30283116 (+)
BALB/cJ	MGP_BALBcJ_G0018074	protein coding gene	Chr11:29534487-29549399 (+)
C3H/HeJ	MGP_C3HHeJ_G0017888	protein coding gene	Chr11:30215487-30227008 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0018527	protein coding gene	Chr11:31515332-31517942 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0016184	protein coding gene	Chr11:27881911-27882348 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0017861	protein coding gene	Chr11:32994595-32995962 (+)
DBA/2J	MGP_DBA2J_G0017971	protein coding gene	Chr11:29138283-29148696 (+)
FVB/NJ	MGP_FVBNJ_G0017965	protein coding gene	Chr11:28959050-28970144 (+)
LP/J	MGP_LPJ_G0018043	protein coding gene	Chr11:30738753-30747111 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0018568	protein coding gene	Chr11:30419560-30420782 (+)
PWK/PhJ	MGP_PWKPhJ_G0017233	protein coding gene	Chr11:29300855-29302136 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Human Ortholog

HBQ1, hemoglobin subunit theta 1

Vertebrate Orthologs

3

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

HBQ1, hemoglobin subunit theta 1
Synonyms

HBQ
Links

HGNC:4833

NCBI Gene ID: 3049

neXtProt AC: NX_P09105

UniProt: P09105
Chr Location

16p13.3; chr16:180459-181179 (+) GRCh38

MGI Vertebrate Homology

Hbq1b stringent orthology
1 human;1 mouse;1 rat;1 zebrafish
HCOP

vertebrate homology predictions: HBQ1
Gene Tree

Hbq1b

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References

3 with disease annotations

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Phenotype Summary

11 phenotype references

All Mutations and Alleles

3
Chemically induced (other)

1
Radiation induced

2
Genomic Mutations

3 involving Hbq1b
Incidental Mutations

Mutagenetix , APF
Find Mice (IMSR)

9 strains or lines available

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All GO Annotations

8
GO References

1

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

723
Tissues

1
cDNA Data

3
Literature Summary

1

Images

Tissue x Stage Matrix

Other Mouse Links

GEO

Expression Atlas

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All Sequences

24
RefSeq

2
UniProt

2
CCDS

CCDS24524.1

Ensembl

ENSMUSG00000073063 (Evidence)
NCBI Gene

544763

			Length	Strain/Species	Flank
genomic	ENSMUSG00000073063	Ensembl Gene Model \| MGI Sequence Detail	820	C57BL/6J	± kb
transcript	ENSMUST00000101387	Ensembl \| MGI Sequence Detail	562	Not Applicable
polypeptide	ENSMUSP00000098936	Ensembl \| MGI Sequence Detail	142	Not Applicable

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UniProt

2 Sequences
InterPro Domains

IPR000971 Globin

IPR009050 Globin-like superfamily

IPR012292 Globin/Protoglobin

IPR002338 Hemoglobin, alpha-type

IPR050056 Hemoglobin and related oxygen transporters

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All nucleic 3

cDNA 3

Microarray probesets 1

Summaries

All 25

Developmental Gene Expression 1

Diseases 3

Gene Ontology 1

Phenotypes 11
Earliest

J:5686 Russell LB, et al., Radiation-induced mutations at mouse hemoglobin loci. Proc Natl Acad Sci U S A. 1976 Aug;73(8):2843-6
Latest

J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

TSS for Hbq1b:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr100840	Chr11:32236946-32236980 (+)	-2 bp
Tssr100841	Chr11:32236991-32237007 (+)	34 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/12/2024 MGI 6.24