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Sec14l3 Gene Detail
Summary
  • Symbol
    Sec14l3
  • Name
    SEC14-like lipid binding 3
  • Synonyms
    1110069O07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3617848
    NCBI Gene: 380683
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:4014841-4027736 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 2.86 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    356 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3617848
 protein coding gene Chr11:4014841-4028990 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017972
 protein coding gene Chr11:982950-1001199 (+)
A/J MGP_AJ_G0017945
 protein coding gene Chr11:1008234-1021008 (+)
AKR/J MGP_AKRJ_G0017909
 protein coding gene Chr11:1057524-1070226 (+)
BALB/cJ MGP_BALBcJ_G0017913
 protein coding gene Chr11:972881-988860 (+)
C3H/HeJ MGP_C3HHeJ_G0017726
 protein coding gene Chr11:955521-967997 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018366
 protein coding gene Chr11:1067111-1083332 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016024
 protein coding gene Chr11:883417-897460 (+)
CAST/EiJ MGP_CASTEiJ_G0017288
 protein coding gene Chr11:914705-930384 (+)
CBA/J MGP_CBAJ_G0017701
 protein coding gene Chr11:1286817-1303750 (+)
DBA/2J MGP_DBA2J_G0017812
 protein coding gene Chr11:906413-921424 (+)
FVB/NJ MGP_FVBNJ_G0017803
 protein coding gene Chr11:940593-953197 (+)
LP/J MGP_LPJ_G0017882
 protein coding gene Chr11:1096457-1113449 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017829
 protein coding gene Chr11:984792-997596 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018405
 protein coding gene Chr11:1055466-1069079 (+)
PWK/PhJ MGP_PWKPhJ_G0017069
 protein coding gene Chr11:898151-911634 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016865
 protein coding gene Chr11:1001581-1019302 (+)
WSB/EiJ MGP_WSBEiJ_G0017342
 protein coding gene Chr11:931099-946033 (+)



Homology
more
  • Human Ortholog
    SEC14L3, SEC14 like lipid binding 3
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SEC14L3, SEC14 like lipid binding 3
  • Synonyms
    TAP2
  • Links
    NCBI Gene ID: 266629
    neXtProt AC: NX_Q9UDX4
    UniProt: Q9UDX4

  • Chr Location
    22q12.2; chr22:30447661-30472017 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000054986 Ensembl Gene Model | MGI Sequence Detail 12896 C57BL/6J ±  kb
transcript ENSMUST00000068322 Ensembl | MGI Sequence Detail 2686 Not Applicable  
polypeptide ENSMUSP00000065084 Ensembl | MGI Sequence Detail 401 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR001251 CRAL-TRIO lipid binding domain
    IPR036865 CRAL-TRIO lipid binding domain superfamily
    IPR011074 CRAL/TRIO, N-terminal domain
    IPR036273 CRAL/TRIO, N-terminal domain superfamily
    IPR009038 GOLD domain
    IPR036598 GOLD domain superfamily
    IPR051064 SEC14-like and CRAL-TRIO domain-containing protein
  • GlyGen
    Q5SQ27 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 6
Other
Accession IDs
less
MGI:1919048
References
more
  • Summaries
    All 22
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory