Zfhx2os Gene Detail

Summary

• Symbol
  Zfhx2os
• Name
  zinc finger homeobox 2, opposite strand
• Synonyms
  Zfh-5 antisense, Zfhx2as

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3620246
  NCBI Gene: 432855
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:55310548-55313331 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 28.06 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3620246	antisense lncRNA gene	Chr14:55291326-55313331 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003250	antisense lncRNA gene	Chr14:49073992-49076779 (+)
A/J	MGP_AJ_G0003226	antisense lncRNA gene	Chr14:48093522-48096309 (+)
AKR/J	MGP_AKRJ_G0003209	antisense lncRNA gene	Chr14:49843105-49845892 (+)
BALB/cJ	MGP_BALBcJ_G0003215	antisense lncRNA gene	Chr14:48071139-48073926 (+)
C3H/HeJ	MGP_C3HHeJ_G0003168	antisense lncRNA gene	Chr14:49533217-49536004 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003357	antisense lncRNA gene	Chr14:51562653-51565436 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002882	antisense lncRNA gene	Chr14:46498722-46501504 (+)
CAST/EiJ	MGP_CASTEiJ_G0003134	antisense lncRNA gene	Chr14:45780770-45783557 (+)
CBA/J	MGP_CBAJ_G0003165	antisense lncRNA gene	Chr14:53117610-53120397 (+)
DBA/2J	MGP_DBA2J_G0003170	antisense lncRNA gene	Chr14:47833510-47836297 (+)
FVB/NJ	MGP_FVBNJ_G0003189	antisense lncRNA gene	Chr14:47300251-47303038 (+)
LP/J	MGP_LPJ_G0003247	antisense lncRNA gene	Chr14:50123784-50126571 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003178	antisense lncRNA gene	Chr14:52482894-52485681 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003359	antisense lncRNA gene	Chr14:49027750-49030537 (+)
PWK/PhJ	MGP_PWKPhJ_G0003092	antisense lncRNA gene	Chr14:44373424-44376211 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003038	antisense lncRNA gene	Chr14:45010365-45013152 (+)
WSB/EiJ	MGP_WSBEiJ_G0003168	antisense lncRNA gene	Chr14:49322902-49325688 (+)

Homology

• Gene Tree
  Zfhx2os
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Targeted
  2
• Genomic Mutations
  1 involving Zfhx2os
• Find Mice (IMSR)
  11 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  775
• Tissues
  39
• cDNA Data
  6
• Literature Summary
  3

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000093452 (Evidence)
• NCBI Gene
  432855

Representative Sequences			Length	Strain/Species
genomic	432855	NCBI Gene Model | MGI Sequence Detail	2784	C57BL/6J
transcript	NR_004444	RefSeq | MGI Sequence Detail	2487	C57BL/6

Molecular
Reagents

• All nucleic 13

  cDNA 6

  Primer pair 7

References

• Summaries
  All 13

  Developmental Gene Expression 3

  Phenotypes 4
• Earliest
  J:106421 Komine Y, et al., Novel transcription factor zfh-5 is negatively regulated by its own antisense RNA in mouse brain. Mol Cell Neurosci. 2006 Feb;31(2):273-83
• Latest
  J:195826 Komine Y, et al., Behavioral abnormalities observed in Zfhx2-deficient mice. PLoS One. 2012;7(12):e53114