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Mir669c Gene Detail
Summary
  • Symbol
    Mir669c
  • Name
    microRNA 669c
  • Synonyms
    mir 669c, Mirn669c, Mirn669c-1, mmu-mir-669c
  • Feature Type
    miRNA gene
  • IDs
    MGI:3629619
    NCBI Gene: 735273
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:10514107-10514215 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 8.22 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    102 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3629619
 miRNA gene Chr2:10514107-10514215 (+)
129S1/SvImJ MGP_129S1SvImJ_G0008487
 miRNA gene Chr2:7866778-7866897 (+)
A/J MGP_AJ_G0008472
 miRNA gene Chr2:7530153-7530263 (+)
AKR/J MGP_AKRJ_G0008456
 miRNA gene Chr2:7774108-7774218 (+)
BALB/cJ MGP_BALBcJ_G0008460
 miRNA gene Chr2:7512274-7512384 (+)
C3H/HeJ MGP_C3HHeJ_G0008399
 miRNA gene Chr2:7698873-7698983 (+)
C57BL/6NJ MGP_C57BL6NJ_G0008666
 miRNA gene Chr2:8063045-8063153 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0008259
 miRNA gene Chr2:7744943-7745048 (+)
CBA/J MGP_CBAJ_G0008365
 miRNA gene Chr2:8385392-8385502 (+)
DBA/2J MGP_DBA2J_G0008402
 miRNA gene Chr2:7453481-7453591 (+)
FVB/NJ MGP_FVBNJ_G0008422
 miRNA gene Chr2:7410619-7410718 (+)
LP/J MGP_LPJ_G0008490
 miRNA gene Chr2:7781101-7781222 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0008384
 miRNA gene Chr2:8357096-8357195 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0008655
 miRNA gene Chr2:7727641-7727749 (+)
PWK/PhJ MGP_PWKPhJ_G0008193
 miRNA gene Chr2:7439344-7439467 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0008345
 miRNA gene Chr2:7820343-7820470 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 735273 NCBI Gene Model | MGI Sequence Detail 109 C57BL/6J ±  kb
transcript NR_030473 RefSeq | MGI Sequence Detail 109 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Other 1
Other Database
Links
less
miRBase MI0004673
References
more
  • Summaries
    All 12
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
  • Latest
    J:338340 Wickramage I, et al., SINE RNA of the imprinted miRNA clusters mediates constitutive type III interferon expression and antiviral protection in hemochorial placentas. Cell Host Microbe. 2023 Jul 12;31(7):1185-1199.e10
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory