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Defa-ps1 Pseudogene Detail
Summary
  • Symbol
    Defa-ps1
  • Name
    defensin, alpha, pseudogene 1
  • Synonyms
    Crypi, Defcr-ps1, Defcr-ps26
  • Feature Type
    pseudogene
  • IDs
    MGI:3630392
    NCBI Gene: 727720
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr8:22185028-22185869 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 10.35 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    32 from dbSNP Build 142
  • Strain Annotations
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3630392
 pseudogene Chr8:22185028-22185869 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    8
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 727720 NCBI Gene Model | MGI Sequence Detail 842 C57BL/6J ±  kb
transcript NR_003146 RefSeq | MGI Sequence Detail 282 Not Specified  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Genomic 1

    Microarray probesets 6
Other
Accession IDs
less
MGD-MRK-16375, MGI:99593
References
more
  • Summaries
    All 13
    Phenotypes 1
  • Earliest
    J:16918 Huttner KM, et al., Structure and diversity of the murine cryptdin gene family. Genomics. 1994 Feb;19(3):448-53
  • Latest
    J:332494 Dong X, et al., Keratinocyte-derived defensins activate neutrophil-specific receptors Mrgpra2a/b to prevent skin dysbiosis and bacterial infection. Immunity. 2022 Jul 15;55(9):1645-1662
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory