Gm15612 Gene Detail

Summary

• Symbol
  Gm15612
• Name
  predicted gene 15612
• Synonyms
  ENSMUSG00000072920

• Feature Type
  lncRNA gene
• IDs
  MGI:3641714
  NCBI Gene: 100038356
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:88819836-88824256 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 39.61 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  191 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3641714	lncRNA gene	Chr6:88819836-88824256 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004318	antisense lncRNA gene	Chr6:90256767-90261183 (+)
A/J	MGP_AJ_G0004296	antisense lncRNA gene	Chr6:86788080-86792556 (+)
AKR/J	MGP_AKRJ_G0004278	antisense lncRNA gene	Chr6:89265422-89269845 (+)
BALB/cJ	MGP_BALBcJ_G0004282	antisense lncRNA gene	Chr6:86775658-86780081 (+)
C3H/HeJ	MGP_C3HHeJ_G0004223	antisense lncRNA gene	Chr6:95172107-95176523 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004431	antisense lncRNA gene	Chr6:92673669-92678086 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003900	antisense lncRNA gene	Chr6:84939705-84944380 (+)
CAST/EiJ	MGP_CASTEiJ_G0004192	antisense lncRNA gene	Chr6:89383618-89388297 (+)
CBA/J	MGP_CBAJ_G0004224	antisense lncRNA gene	Chr6:96216501-96220914 (+)
DBA/2J	MGP_DBA2J_G0004240	antisense lncRNA gene	Chr6:86067519-86071933 (+)
FVB/NJ	MGP_FVBNJ_G0004256	antisense lncRNA gene	Chr6:85261263-85265678 (+)
LP/J	MGP_LPJ_G0004319	antisense lncRNA gene	Chr6:90282909-90287321 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004247	antisense lncRNA gene	Chr6:100323166-100327578 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004429	antisense lncRNA gene	Chr6:89130131-89134544 (+)
PWK/PhJ	MGP_PWKPhJ_G0004145	antisense lncRNA gene	Chr6:85049223-85053905 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004088	antisense lncRNA gene	Chr6:87936795-87941494 (+)
WSB/EiJ	MGP_WSBEiJ_G0004229	antisense lncRNA gene	Chr6:89583862-89588276 (+)

Homology

• Gene Tree
  Gm15612
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm15612
• Find Mice (IMSR)
  1 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000085828 (Evidence)
• NCBI Gene
  100038356

Representative Sequences			Length	Strain/Species
genomic	100038356	NCBI Gene Model | MGI Sequence Detail	4421	C57BL/6J
transcript	NR_045880	RefSeq | MGI Sequence Detail	3118	C57BL/6
polypeptide	Q3V0D0	UniProt | EBI | MGI Sequence Detail	155	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 13

  Phenotypes 4
• Earliest
  J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
• Latest
  J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)