Gm15238 Pseudogene Detail

Summary

• Symbol
  Gm15238
• Name
  predicted gene 15238
• Synonyms
  ENSMUSG00000071634

• Feature Type
  pseudogene
• IDs
  MGI:3641766
  NCBI Gene: 100417280
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:166559257-166560552 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 78.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3641766	pseudogene	ChrX:166559066-166560744 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015010	pseudogene	ChrX:165961622-165962917 (+)
A/J	MGP_AJ_G0015000	pseudogene	ChrX:165097963-165099258 (+)
AKR/J	MGP_AKRJ_G0014939	pseudogene	ChrX:170385991-170387286 (+)
BALB/cJ	MGP_BALBcJ_G0014954	pseudogene	ChrX:163039313-163040608 (+)
C3H/HeJ	MGP_C3HHeJ_G0014793	pseudogene	ChrX:166277683-166278978 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015441	pseudogene	ChrX:170784717-170786012 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013060	pseudogene	ChrX:155868228-155869521 (+)
CAST/EiJ	MGP_CASTEiJ_G0014396	pseudogene	ChrX:145150131-145151425 (+)
CBA/J	MGP_CBAJ_G0014779	pseudogene	ChrX:175753116-175754411 (+)
DBA/2J	MGP_DBA2J_G0014862	pseudogene	ChrX:163890162-163891457 (+)
FVB/NJ	MGP_FVBNJ_G0014843	pseudogene	ChrX:163034660-163035955 (+)
LP/J	MGP_LPJ_G0014963	pseudogene	ChrX:167055591-167056886 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014889	pseudogene	ChrX:184455205-184456500 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015426	pseudogene	ChrX:165421540-165422835 (+)
PWK/PhJ	MGP_PWKPhJ_G0014189	pseudogene	ChrX:141863485-141864779 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013975	pseudogene	ChrX:145705087-145706378 (+)
WSB/EiJ	MGP_WSBEiJ_G0014478	pseudogene	ChrX:163250880-163252175 (+)

Homology

• Gene Tree
  Gm15238
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084378 (Evidence)
• NCBI Gene
  100417280

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084378	Ensembl Gene Model | MGI Sequence Detail	1296	C57BL/6J
transcript	ENSMUST00000119938	Ensembl | MGI Sequence Detail	1296	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;