Gm15470 Pseudogene Detail

Summary

• Symbol
  Gm15470
• Name
  predicted gene 15470
• Synonyms
  ENSMUSG00000049696

• Feature Type
  pseudogene
• IDs
  MGI:3641891
  NCBI Gene: 100039375
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:41139775-41141145 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 28.25 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  139 from dbSNP Build 142
• Strain Annotations
  5

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3641891	pseudogene	Chr7:41139580-41141347 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010959	pseudogene	Chr12:118852367-118853701 (-)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0014289	pseudogene	Chr7:43289804-43293759 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0013928	pseudogene	Chr7:110543792-110545242 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0011123	pseudogene	Chr12:297935-299301 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm15470
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  9
• RefSeq
  1

• Ensembl
  ENSMUSG00000083500 (Evidence)
• NCBI Gene
  100039375

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083500	Ensembl Gene Model | MGI Sequence Detail	1371	C57BL/6J
transcript	ENSMUST00000119135	Ensembl | MGI Sequence Detail	1371	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;