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3110082J24Rik Gene Detail
Summary
  • Symbol
    3110082J24Rik
  • Name
    RIKEN cDNA 3110082J24 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3641994
    NCBI Gene: 433868
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:30308582-30311084 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 15.92 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    130 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3641994
 lncRNA gene Chr5:30308573-30311095 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029382
 protein coding gene Chr5:28074116-28089657 (-)
A/J MGP_AJ_G0029348
 protein coding gene Chr5:27148291-27150721 (-)
AKR/J MGP_AKRJ_G0029299
 protein coding gene Chr5:28233090-28235588 (-)
BALB/cJ MGP_BALBcJ_G0029359
 protein coding gene Chr5:27677981-27680473 (-)
C3H/HeJ MGP_C3HHeJ_G0029080
 protein coding gene Chr5:28263303-28265796 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029812
 protein coding gene Chr5:29803871-29806358 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027050
 protein coding gene Chr5:24669206-24671683 (-)
CAST/EiJ MGP_CASTEiJ_G0028491
 protein coding gene Chr5:27366915-27369376 (-)
CBA/J MGP_CBAJ_G0029048
 protein coding gene Chr5:30354953-30357373 (-)
DBA/2J MGP_DBA2J_G0029197
 protein coding gene Chr5:27344333-27356002 (-)
FVB/NJ MGP_FVBNJ_G0029155
 protein coding gene Chr5:26754500-26757047 (-)
LP/J MGP_LPJ_G0029282
 protein coding gene Chr5:28530303-28536823 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0029184
 protein coding gene Chr5:31305292-31307803 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029846
 protein coding gene Chr5:27796371-27798899 (-)
PWK/PhJ MGP_PWKPhJ_G0028215
 protein coding gene Chr5:26462775-26465663 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028046
 protein coding gene Chr5:27138850-27143151 (-)
WSB/EiJ MGP_WSBEiJ_G0028571
 protein coding gene Chr5:27872544-27875702 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    22 phenotype references
  • All Mutations and Alleles
    7
  • Chemically induced (other)
    2
  • Gene trapped
    1
  • Radiation induced
    3
  • Spontaneous
    1
  • Genomic Mutations
    6 involving 3110082J24Rik
  • Find Mice (IMSR)
    2 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086815 Ensembl Gene Model | MGI Sequence Detail 2503 C57BL/6J ±  kb
transcript ENSMUST00000199573 Ensembl | MGI Sequence Detail 767 Not Applicable  
polypeptide Q3V208 UniProt | EBI | MGI Sequence Detail 167 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 35
    Diseases 1
    Phenotypes 22
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory