Gm9921 Gene Detail

Summary

• Symbol
  Gm9921
• Name
  predicted gene 9921

• Feature Type
  lncRNA gene
• IDs
  MGI:3642033
  NCBI Gene: 791317
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:45476160-45488481 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 21.09 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  520 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642033	lncRNA gene	Chr12:45476160-45488481 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015230	unclassified non-coding RNA gene	Chr12:44070702-44075220 (+)
A/J	MGP_AJ_G0015204	unclassified non-coding RNA gene	Chr12:42443773-42448290 (+)
AKR/J	MGP_AKRJ_G0015167	unclassified non-coding RNA gene	Chr12:43818982-43823499 (+)
BALB/cJ	MGP_BALBcJ_G0015166	unclassified non-coding RNA gene	Chr12:42753361-42757878 (+)
C3H/HeJ	MGP_C3HHeJ_G0014990	unclassified non-coding RNA gene	Chr12:43794958-43799475 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015623	unclassified non-coding RNA gene	Chr12:45321902-45326419 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013365	unclassified non-coding RNA gene	Chr12:41391318-41396549 (+)
CAST/EiJ	MGP_CASTEiJ_G0014543	unclassified non-coding RNA gene	Chr12:38938490-38943022 (+)
CBA/J	MGP_CBAJ_G0014969	unclassified non-coding RNA gene	Chr12:46795148-46799665 (+)
DBA/2J	MGP_DBA2J_G0015062	unclassified non-coding RNA gene	Chr12:42303949-42308467 (+)
FVB/NJ	MGP_FVBNJ_G0015073	unclassified non-coding RNA gene	Chr12:41853631-41858149 (+)
LP/J	MGP_LPJ_G0015143	unclassified non-coding RNA gene	Chr12:44031652-44036170 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015100	unclassified non-coding RNA gene	Chr12:47555605-47560169 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015662	unclassified non-coding RNA gene	Chr12:43348081-43352611 (+)
PWK/PhJ	MGP_PWKPhJ_G0014335	unclassified non-coding RNA gene	Chr12:36960231-36964809 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014122	unclassified non-coding RNA gene	Chr12:37982010-37986570 (+)
WSB/EiJ	MGP_WSBEiJ_G0014646	unclassified non-coding RNA gene	Chr12:43664811-43669326 (+)

Homology

• Gene Tree
  Gm9921
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• UniProt
  1

• Ensembl
  ENSMUSG00000092404 (Evidence)
• NCBI Gene
  791317

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092404	Ensembl Gene Model | MGI Sequence Detail	12322	C57BL/6J
transcript	ENSMUST00000173293	Ensembl | MGI Sequence Detail	4399	Not Applicable
polypeptide	Q8C4H4	UniProt | EBI | MGI Sequence Detail	129	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;