AB010352 Gene Detail

Summary

• Symbol
  AB010352
• Name
  cDNA sequence AB010352

• Feature Type
  protein coding gene
• IDs
  MGI:3642128
  NCBI Gene: 105246961
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:110014594-110031560 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  633 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642128	protein coding gene	Chr5:110012944-110037836 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  AB010352
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving AB010352
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  8
• UniProt
  3

• Ensembl
  ENSMUSG00000121596 (Evidence)
• NCBI Gene
  105246961

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121596	Ensembl Gene Model | MGI Sequence Detail	16967	C57BL/6J
transcript	ENSMUST00000249389	Ensembl | MGI Sequence Detail	2205	Not Applicable
polypeptide	ENSMUSP00000159746	Ensembl | MGI Sequence Detail	551	Not Applicable

Protein
Information

• UniProt
  3 Sequences
• InterPro Domains
  IPR036051 KRAB domain superfamily
  IPR001909 Krueppel-associated box
  IPR050169 Krueppel C2H2-type zinc-finger
  IPR050331 Zinc finger
  IPR036236 Zinc finger C2H2 superfamily
  IPR013087 Zinc finger C2H2-type
  IPR050758 Zinc finger protein, C2H2-type

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 13

  Phenotypes 5
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for AB010352:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr47861	Chr5:110014567-110014613 (+)	-4 bp