D630002J18Rik Gene Detail

Summary

• Symbol
  D630002J18Rik
• Name
  RIKEN cDNA D630002J18 gene

• Feature Type
  protein coding gene
• IDs
  MGI:3642398
  NCBI Gene: 100036544
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:151871011-151872125 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642398	protein coding gene	Chr3:151871011-151872125 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001320	unclassified gene	Chr3:156006793-156007907 (+)
A/J	MGP_AJ_G0001301	unclassified gene	Chr3:150357334-150358448 (+)
AKR/J	MGP_AKRJ_G0001288	unclassified gene	Chr3:154315825-154316939 (+)
BALB/cJ	MGP_BALBcJ_G0001296	unclassified gene	Chr3:150195117-150196231 (+)
C3H/HeJ	MGP_C3HHeJ_G0001274	unclassified gene	Chr3:154759146-154760260 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001413	unclassified gene	Chr3:161159101-161160215 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001114	unclassified gene	Chr3:145193636-145194750 (+)
CAST/EiJ	MGP_CASTEiJ_G0001256	unclassified gene	Chr3:154831259-154832373 (+)
CBA/J	MGP_CBAJ_G0001265	unclassified gene	Chr3:166946907-166948021 (+)
DBA/2J	MGP_DBA2J_G0001271	unclassified gene	Chr3:149464228-149465342 (+)
FVB/NJ	MGP_FVBNJ_G0001281	unclassified gene	Chr3:146841868-146842982 (+)
LP/J	MGP_LPJ_G0001326	unclassified gene	Chr3:157385860-157386974 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001267	unclassified gene	Chr3:175473356-175474470 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001403	unclassified gene	Chr3:154009267-154010381 (+)
PWK/PhJ	MGP_PWKPhJ_G0001211	unclassified gene	Chr3:149347657-149348771 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001187	unclassified gene	Chr3:152167773-152168890 (+)
WSB/EiJ	MGP_WSBEiJ_G0001272	unclassified gene	Chr3:155019484-155020598 (+)

Homology

• Gene Tree
  D630002J18Rik
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• UniProt
  1

• Ensembl
  ENSMUSG00000097293 (Evidence)
• NCBI Gene
  100036544

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097293	Ensembl Gene Model | MGI Sequence Detail	1115	C57BL/6J
transcript	AK052598	GenBank | ENA | DDBJ | MGI Sequence Detail	1116	C57BL/6J
polypeptide	Q8C738	UniProt | EBI | MGI Sequence Detail	108	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 8
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;