Gm15429 Pseudogene Detail

Summary

• Symbol
  Gm15429
• Name
  predicted pseudogene 15429
• Synonyms
  ENSMUSG00000040323

• Feature Type
  pseudogene
• IDs
  MGI:3642423
  NCBI Gene: 100039623
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:161553811-161555058 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 69.95 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  65 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642423	pseudogene	Chr1:161553105-161555260 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012295	pseudogene	Chr3:96677215-96679801 (+)
A/J	MGP_AJ_G0012289	pseudogene	Chr3:93647568-93651087 (+)
AKR/J	MGP_AKRJ_G0012256	pseudogene	Chr3:95830627-95833213 (+)
BALB/cJ	MGP_BALBcJ_G0012272	pseudogene	Chr3:93428807-93431393 (+)
C3H/HeJ	MGP_C3HHeJ_G0012138	pseudogene	Chr3:96131704-96135096 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012584	pseudogene	Chr3:100221697-100226387 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010972	pseudogene	Chr3:89975454-89978197 (+)
CAST/EiJ	MGP_CASTEiJ_G0011910	pseudogene	Chr3:95410493-95414026 (+)
CBA/J	MGP_CBAJ_G0012116	pseudogene	Chr3:103891176-103897784 (+)
DBA/2J	MGP_DBA2J_G0012172	pseudogene	Chr3:92939558-92942144 (+)
FVB/NJ	MGP_FVBNJ_G0012174	pseudogene	Chr3:91018292-91020878 (+)
LP/J	MGP_LPJ_G0012242	pseudogene	Chr3:97990066-97993740 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012178	pseudogene	Chr3:110016379-110021345 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012589	pseudogene	Chr3:95479051-95482432 (+)
PWK/PhJ	MGP_PWKPhJ_G0011755	pseudogene	Chr3:92836786-92839372 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011571	pseudogene	Chr3:93771485-93774068 (+)
WSB/EiJ	MGP_WSBEiJ_G0011941	pseudogene	Chr3:95870714-95874963 (+)

Homology

• Gene Tree
  Gm15429
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm15429
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000040323 (Evidence)
• NCBI Gene
  100039623

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000040323	Ensembl Gene Model | MGI Sequence Detail	1248	C57BL/6J
transcript	ENSMUST00000151268	Ensembl | MGI Sequence Detail	798	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;