Gm10444 Pseudogene Detail

Summary

• Symbol
  Gm10444
• Name
  predicted pseudogene 10444

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3642569
  NCBI Gene: 102635901
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:85117487-85120631 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 37.16 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  171 from dbSNP Build 142
• Strain Annotations
  8

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642569	pseudogene	Chr6:85114917-85120703 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0040447	pseudogene	Chr6:82987627-82990676 (+)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0041063	pseudogene	Chr6:88610563-88610681 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039133	pseudogene	Chr6:85419296-85424678 (-)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0040190	pseudogene	Chr6:81482644-81484973 (+)
LP/J	MGP_LPJ_G0040282	pseudogene	Chr6:86259577-86263177 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0041139	pseudogene	Chr6:85196443-85202026 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0038523	pseudogene	Chr6:84052771-84055548 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm10444
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  12
• RefSeq
  1

• Ensembl
  ENSMUSG00000072950 (Evidence)
• NCBI Gene
  102635901

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000072950	Ensembl Gene Model | MGI Sequence Detail	3145	C57BL/6J
transcript	ENSMUST00000126708	Ensembl | MGI Sequence Detail	148	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;