Gm16485 Gene Detail

Summary

• Symbol
  Gm16485
• Name
  predicted gene 16485

• Feature Type
  protein coding gene
• IDs
  MGI:3642771
  NCBI Gene: 791396
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:8971792-8975774 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 2.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  219 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642771	protein coding gene	Chr9:8971792-8975774 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0034337	protein coding gene	Chr9:5845045-5849038 (+)
A/J	MGP_AJ_G0034315	protein coding gene	Chr9:5979330-5983312 (+)
AKR/J	MGP_AKRJ_G0034243	protein coding gene	Chr9:5796867-5800857 (+)
BALB/cJ	MGP_BALBcJ_G0034309	protein coding gene	Chr9:5686987-5690969 (+)
C3H/HeJ	MGP_C3HHeJ_G0034020	protein coding gene	Chr9:6037365-6041347 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0034831	protein coding gene	Chr9:6056541-6060523 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0031769	protein coding gene	Chr9:5098826-5102823 (+)
CAST/EiJ	MGP_CASTEiJ_G0033348	protein coding gene	Chr9:5971987-5975937 (+)
CBA/J	MGP_CBAJ_G0033993	protein coding gene	Chr9:6314309-6318291 (+)
DBA/2J	MGP_DBA2J_G0034150	protein coding gene	Chr9:5824174-5828156 (+)
FVB/NJ	MGP_FVBNJ_G0034095	protein coding gene	Chr9:5561350-5565332 (+)
LP/J	MGP_LPJ_G0034236	protein coding gene	Chr9:5859576-5863569 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0034139	protein coding gene	Chr9:6987836-6991818 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0034850	protein coding gene	Chr9:5810577-5814559 (+)
PWK/PhJ	MGP_PWKPhJ_G0033051	protein coding gene	Chr9:5891215-5895142 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0032889	protein coding gene	Chr9:6006241-6010197 (+)
WSB/EiJ	MGP_WSBEiJ_G0033463	protein coding gene	Chr9:5801043-5805023 (+)

Homology

• Gene Tree
  Gm16485
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  5 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• UniProt
  1

• Ensembl
  ENSMUSG00000078117 (Evidence)
• NCBI Gene
  791396

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000078117	Ensembl Gene Model | MGI Sequence Detail	3983	C57BL/6J
transcript	AK082585	GenBank | ENA | DDBJ | MGI Sequence Detail	3985	C57BL/6J
polypeptide	Q8C4B7	UniProt | EBI | MGI Sequence Detail	115	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 3

  cDNA 3

  
  

  Microarray probesets 1

References

• Summaries
  All 8
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;