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Vmn2r65 Gene Detail
Summary
  • Symbol
    Vmn2r65
  • Name
    vomeronasal 2, receptor 65
  • Synonyms
    ENSMUSG00000070600
  • Feature Type
    protein coding gene
  • IDs
    MGI:3642776
    NCBI Gene: 100009609
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:84589377-84613217 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 48.38 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    618 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642776
 protein coding gene Chr7:84584773-84613323 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032462
 protein coding gene Chr7:87125847-87152808 (-)
A/J MGP_AJ_G0032440
 protein coding gene Chr7:85038676-85058971 (-)
AKR/J MGP_AKRJ_G0032377
 protein coding gene Chr7:87024525-87043795 (-)
BALB/cJ MGP_BALBcJ_G0032453
 protein coding gene Chr7:84702362-84723018 (-)
C3H/HeJ MGP_C3HHeJ_G0032166
 protein coding gene Chr7:87530651-87550641 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032944
 protein coding gene Chr7:90570018-90591664 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029952
 protein coding gene Chr7:87398705-87421016 (-)
CAST/EiJ MGP_CASTEiJ_G0031493
 protein coding gene Chr7:78526009-78544894 (-)
CBA/J MGP_CBAJ_G0032132
 protein coding gene Chr7:93531715-93556850 (-)
DBA/2J MGP_DBA2J_G0032285
 protein coding gene Chr7:83541080-83560974 (-)
FVB/NJ MGP_FVBNJ_G0032239
 protein coding gene Chr7:83480074-83499521 (-)
LP/J MGP_LPJ_G0032368
 protein coding gene Chr7:88399098-88420061 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032278
 protein coding gene Chr7:93559666-93594495 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032964
 protein coding gene Chr7:86375150-86400397 (-)
PWK/PhJ MGP_PWKPhJ_G0031213
 protein coding gene Chr7:76804900-76824098 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031055
 protein coding gene Chr7:73391237-73415482 (-)
WSB/EiJ MGP_WSBEiJ_G0031610
 protein coding gene Chr7:86760253-86785078 (-)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    1 phenotype from multigenic genotypes
    26 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Male mice homozygous for a knock-out allele exhibit decreased aggression toward pups and increased pup retrieval.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    4
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 100009609 NCBI Gene Model | MGI Sequence Detail 23841 C57BL/6J ±  kb
transcript NM_001105180 RefSeq | MGI Sequence Detail 2538 C57BL/6  
polypeptide NP_001098650 RefSeq | MGI Sequence Detail 845 C57BL/6  
For the selected sequence
Protein
Information
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  • UniProt
    4 Sequences
  • InterPro Domains
    IPR000337 GPCR, family 3
    IPR017978 GPCR family 3, C-terminal
    IPR000068 GPCR, family 3, extracellular calcium-sensing receptor-related
    IPR011500 GPCR, family 3, nine cysteines domain
    IPR038550 GPCR, family 3, nine cysteines domain superfamily
    IPR004073 GPCR, family 3, vomeronasal receptor, type 2
    IPR028082 Periplasmic binding protein-like I
    IPR001828 Receptor, ligand binding region
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 38
    Gene Ontology 2
    Phenotypes 26
  • Earliest
    J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
  • Latest
    J:296898 Tonelli Gombalova Z, et al., Majority of cerebrospinal fluid-contacting neurons in the spinal cord of C57Bl/6N mice is present in ectopic position unlike in other studied experimental mice strains and mammalian species. J Comp Neurol. 2020 Oct 15;528(15):2523-2550
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory