Gm9972 Gene Detail

Summary

• Symbol
  Gm9972
• Name
  predicted gene 9972

• Feature Type
  protein coding gene
• IDs
  MGI:3642779
  NCBI Gene: 791397
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:42926573-42928105 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 25.68 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  134 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642779	protein coding gene	Chr11:42926573-42928105 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0018169	protein coding gene	Chr11:41775972-41777484 (+)
A/J	MGP_AJ_G0018141	protein coding gene	Chr11:40181569-40183081 (+)
AKR/J	MGP_AKRJ_G0018105	protein coding gene	Chr11:41355350-41356862 (+)
BALB/cJ	MGP_BALBcJ_G0018110	protein coding gene	Chr11:40356360-40357872 (+)
C3H/HeJ	MGP_C3HHeJ_G0017923	protein coding gene	Chr11:41396382-41397894 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0018564	protein coding gene	Chr11:43057291-43058821 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0016219	protein coding gene	Chr11:38277422-38279127 (+)
CAST/EiJ	MGP_CASTEiJ_G0017487	protein coding gene	Chr11:41446697-41448207 (+)
CBA/J	MGP_CBAJ_G0017896	protein coding gene	Chr11:45038298-45039810 (+)
DBA/2J	MGP_DBA2J_G0018006	protein coding gene	Chr11:39982701-39984212 (+)
FVB/NJ	MGP_FVBNJ_G0018000	protein coding gene	Chr11:39664163-39665675 (+)
LP/J	MGP_LPJ_G0018078	protein coding gene	Chr11:42024409-42025921 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0018024	protein coding gene	Chr11:46674575-46676087 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0018603	protein coding gene	Chr11:41496745-41498266 (+)
PWK/PhJ	MGP_PWKPhJ_G0017268	protein coding gene	Chr11:39994552-39996064 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0017060	protein coding gene	Chr11:41313891-41315380 (+)
WSB/EiJ	MGP_WSBEiJ_G0017536	protein coding gene	Chr11:41145352-41146863 (+)

Homology

• Gene Tree
  Gm9972
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm9972
• Find Mice (IMSR)
  2 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• UniProt
  1

• Ensembl
  ENSMUSG00000055456 (Evidence)
• NCBI Gene
  791397

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000055456	Ensembl Gene Model | MGI Sequence Detail	1533	C57BL/6J
transcript	AK086464	GenBank | ENA | DDBJ | MGI Sequence Detail	1534	C57BL/6J
polypeptide	Q8BUA5	UniProt | EBI | MGI Sequence Detail	102	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 11

  Phenotypes 4
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6