Fthl17b Gene Detail

Summary

• Symbol
  Fthl17b
• Name
  ferritin, heavy polypeptide-like 17, member B
• Synonyms
  Gm5634

• Feature Type
  protein coding gene
• IDs
  MGI:3642940
  NCBI Gene: 434726
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:8828373-8829214 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 4.07 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  5

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642940	protein coding gene	ChrX:8828373-8829214 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	MGP_AKRJ_G0035459	protein coding gene	ChrX:3804352-3806631 (+)
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0036050	protein coding gene	ChrX:3833104-3833936 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0035360	protein coding gene	ChrX:3678639-3679372 (-)
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0034666	protein coding gene	ChrX:3742683-3743080 (+)

Homology

• Human Ortholog
  FTH1P19, ferritin heavy chain 1 pseudogene 19

• Vertebrate Orthologs
  5

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  FTH1P19, ferritin heavy chain 1 pseudogene 19
  
• Synonyms
  FTHL19
• Links
  HGNC:33525

  NCBI Gene ID: 389844

  UniProt: P0C7X4

  
  
• Chr Location
  Xp21.1; chrX:37491957-37492720 (+)  GRCh38

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• Human Ortholog
  FTHL17, ferritin heavy chain like 17
  
• Synonyms
  CT38
• Links
  HGNC:3987

  NCBI Gene ID: 53940

  neXtProt AC: NX_Q9BXU8

  UniProt: Q9BXU8

  
  
• Chr Location
  Xp21.2; chrX:31071233-31072041 (-)  GRCh38

---

• MGI Vertebrate Homology
  Fthl17b stringent orthology
  2 human;1 mouse;1 rat;2 zebrafish
  
• HCOP
  vertebrate homology predictions: FTH1P19, FTHL17
• Gene Tree
  Fthl17b
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Find Mice (IMSR)
  8 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  3
• GO References
  1

Expression

• Assay Results
  714
• Tissues
  4
• Literature Summary
  1

Images

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  12
• RefSeq
  2
• UniProt
  1
• CCDS
  CCDS52993.1

• Ensembl
  ENSMUSG00000078208 (Evidence)
• NCBI Gene
  434726

Representative Sequences			Length	Strain/Species
genomic	434726	NCBI Gene Model | MGI Sequence Detail	842	C57BL/6J
transcript	NM_001085524	RefSeq | MGI Sequence Detail	842	C57BL/6
polypeptide	NP_001078993	RefSeq | MGI Sequence Detail	176	C57BL/6

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR001519 Ferritin
  IPR014034 Ferritin, conserved site
  IPR008331 Ferritin/DPS protein domain
  IPR012347 Ferritin-like
  IPR009040 Ferritin-like diiron domain
  IPR009078 Ferritin-like superfamily

Molecular
Reagents

• All nucleic 1

  Primer pair 1

References

• Summaries
  All 9

  Developmental Gene Expression 1

  Gene Ontology 1

  Phenotypes 1
• Earliest
  J:173437 Kobayashi S, et al., The X-linked imprinted gene family Fthl17 shows predominantly female expression following the two-cell stage in mouse embryos. Nucleic Acids Res. 2010 Jun 1;38(11):3672-81