Gm9274 Pseudogene Detail

Summary

• Symbol
  Gm9274
• Name
  predicted gene 9274

• Feature Type
  pseudogene
• IDs
  MGI:3643071
  NCBI Gene: 668624
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr14:88586808-88587791 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 44.33 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643071	pseudogene	Chr14:88586615-88587808 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011138	pseudogene	Chr14:83890581-83891564 (-)
A/J	MGP_AJ_G0011131	pseudogene	Chr14:81674615-81675598 (-)
AKR/J	MGP_AKRJ_G0011091	pseudogene	Chr14:84096531-84097514 (-)
BALB/cJ	MGP_BALBcJ_G0011102	pseudogene	Chr14:81631978-81632961 (-)
C3H/HeJ	MGP_C3HHeJ_G0011002	pseudogene	Chr14:83816341-83817324 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011394	pseudogene	Chr14:87386650-87387633 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009979	pseudogene	Chr14:79294612-79295595 (-)
CAST/EiJ	MGP_CASTEiJ_G0010824	pseudogene	Chr14:80847924-80848907 (-)
CBA/J	MGP_CBAJ_G0010979	pseudogene	Chr14:90332826-90333809 (-)
DBA/2J	MGP_DBA2J_G0011025	pseudogene	Chr14:80976042-80977025 (-)
FVB/NJ	MGP_FVBNJ_G0011030	pseudogene	Chr14:80299266-80300249 (-)
LP/J	MGP_LPJ_G0011116	pseudogene	Chr14:84900767-84901750 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011021	pseudogene	Chr14:90307988-90308971 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011372	pseudogene	Chr14:83380363-83381346 (-)
PWK/PhJ	MGP_PWKPhJ_G0010694	pseudogene	Chr14:77839814-77840797 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010868	pseudogene	Chr14:83902288-83903271 (-)

Homology

• Gene Tree
  Gm9274
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm9274
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000098095 (Evidence)
• NCBI Gene
  668624

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098095	Ensembl Gene Model | MGI Sequence Detail	984	C57BL/6J
transcript	ENSMUST00000182505	Ensembl | MGI Sequence Detail	984	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm9274:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr129940	Chr14:88587862-88587865 (-)	-73 bp