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Lypd11 Gene Detail
Summary
  • Symbol
    Lypd11
  • Name
    Ly6/PLAUR domain containing 11
  • Synonyms
    Gm4763
  • Feature Type
    protein coding gene
  • IDs
    MGI:3643098
    NCBI Gene: 210155
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:24414456-24426333 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 12.46 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    393 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643098
 protein coding gene Chr7:24414448-24426333 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031841
 protein coding gene Chr7:23081370-23093984 (-)
A/J MGP_AJ_G0031820
 protein coding gene Chr7:22539168-22558300 (-)
AKR/J MGP_AKRJ_G0031749
 protein coding gene Chr7:23033735-23046339 (-)
BALB/cJ MGP_BALBcJ_G0031826
 protein coding gene Chr7:22735568-22762658 (-)
C3H/HeJ MGP_C3HHeJ_G0031546
 protein coding gene Chr7:23456443-23478652 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032289
 protein coding gene Chr7:23834885-23861894 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0030886
 protein coding gene Chr7:16931059-16965833 (-)
CBA/J MGP_CBAJ_G0031511
 protein coding gene Chr7:24734370-24756067 (-)
DBA/2J MGP_DBA2J_G0031665
 protein coding gene Chr7:22440506-22461283 (-)
FVB/NJ MGP_FVBNJ_G0031618
 protein coding gene Chr7:22410536-22434338 (-)
LP/J MGP_LPJ_G0031744
 protein coding gene Chr7:23440949-23448687 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031655
 protein coding gene Chr7:24492440-24494287 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032321
 protein coding gene Chr7:22767934-22785758 (-)
PWK/PhJ MGP_PWKPhJ_G0030610
 protein coding gene Chr7:17358242-17361471 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030441
 protein coding gene Chr7:14055846-14112429 (-)
WSB/EiJ MGP_WSBEiJ_G0030990
 protein coding gene Chr7:22898999-22914478 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 210155 NCBI Gene Model | MGI Sequence Detail 11878 C57BL/6J ±  kb
transcript NM_001381982 RefSeq | MGI Sequence Detail 1065 C57BL/6  
polypeptide NP_001368911 RefSeq | MGI Sequence Detail 248 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR051899 Fertilization and immune response mediator protein
    IPR016054 Ly-6 antigen/uPA receptor-like
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
Other
Accession IDs
less
MGI:6278305
References
more
  • Summaries
    All 13
    Gene Ontology 1
  • Earliest
    J:270449 Loughner CL, et al., Organization, evolution and functions of the human and mouse Ly6/uPAR family genes. Hum Genomics. 2016 Apr 21;10:10
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory