Gm5706 Pseudogene Detail

Summary

• Symbol
  Gm5706
• Name
  predicted gene 5706

• Feature Type
  pseudogene
• IDs
  MGI:3643223
  NCBI Gene: 435657
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:182220108-182221100 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 84.93 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643223	pseudogene	Chr1:182219910-182221118 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010462	pseudogene	Chr1:189019311-189020303 (-)
A/J	MGP_AJ_G0010449	pseudogene	Chr1:181313948-181315270 (-)
AKR/J	MGP_AKRJ_G0010419	pseudogene	Chr1:186691744-186692736 (-)
BALB/cJ	MGP_BALBcJ_G0010427	pseudogene	Chr1:181947774-181948766 (-)
C3H/HeJ	MGP_C3HHeJ_G0010356	pseudogene	Chr1:187506778-187507770 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010699	pseudogene	Chr1:195121715-195122707 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009374	pseudogene	Chr1:172385096-172386096 (-)
CAST/EiJ	MGP_CASTEiJ_G0010177	pseudogene	Chr1:186848585-186849569 (-)
CBA/J	MGP_CBAJ_G0010324	pseudogene	Chr1:202349973-202350965 (-)
DBA/2J	MGP_DBA2J_G0010355	pseudogene	Chr1:180092596-180093588 (-)
FVB/NJ	MGP_FVBNJ_G0010379	pseudogene	Chr1:178223982-178224974 (-)
LP/J	MGP_LPJ_G0010444	pseudogene	Chr1:190212600-190213592 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010342	pseudogene	Chr1:209371369-209372361 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010669	pseudogene	Chr1:186514491-186515479 (-)
PWK/PhJ	MGP_PWKPhJ_G0010078	pseudogene	Chr1:179277609-179278715 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009893	pseudogene	Chr1:185471955-185472955 (-)
WSB/EiJ	MGP_WSBEiJ_G0010248	pseudogene	Chr1:186708966-186709954 (-)

Homology

• Gene Tree
  Gm5706
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000097260 (Evidence)
• NCBI Gene
  435657

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097260	Ensembl Gene Model | MGI Sequence Detail	993	C57BL/6J
transcript	ENSMUST00000181525	Ensembl | MGI Sequence Detail	993	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;