Gm10654 Gene Detail

Summary

• Symbol
  Gm10654
• Name
  predicted gene 10654
• Synonyms
  EG665828

• Feature Type
  protein coding gene
• IDs
  MGI:3643366
  NCBI Gene: 665828
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:71384049-71385681 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 34.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643366	protein coding gene	Chr8:71383959-71385681 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0033736	protein coding gene	Chr8:71248503-71250108 (+)
A/J	MGP_AJ_G0033719	protein coding gene	Chr8:68338350-68339982 (+)
AKR/J	MGP_AKRJ_G0033644	protein coding gene	Chr8:70323950-70325555 (+)
BALB/cJ	MGP_BALBcJ_G0033715	protein coding gene	Chr8:68570529-68572134 (+)
C3H/HeJ	MGP_C3HHeJ_G0033425	protein coding gene	Chr8:70943993-70945598 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0034232	protein coding gene	Chr8:73927854-73929486 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0031175	protein coding gene	Chr8:63155573-63157213 (+)
CAST/EiJ	MGP_CASTEiJ_G0032750	protein coding gene	Chr8:70427423-70429030 (+)
CBA/J	MGP_CBAJ_G0033403	protein coding gene	Chr8:76598229-76599834 (+)
DBA/2J	MGP_DBA2J_G0033557	protein coding gene	Chr8:68060382-68061987 (+)
FVB/NJ	MGP_FVBNJ_G0033498	protein coding gene	Chr8:67195088-67196693 (+)
LP/J	MGP_LPJ_G0033644	protein coding gene	Chr8:71267262-71268867 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0033541	protein coding gene	Chr8:79228824-79230456 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0034250	protein coding gene	Chr8:70481444-70483049 (+)
PWK/PhJ	MGP_PWKPhJ_G0032457	protein coding gene	Chr8:67356447-67358080 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0032294	protein coding gene	Chr8:69455061-69456701 (+)
WSB/EiJ	MGP_WSBEiJ_G0032865	protein coding gene	Chr8:70842654-70844260 (+)

Homology

• Gene Tree
  Gm10654
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm10654
• Find Mice (IMSR)
  2 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000074252 (Evidence)
• NCBI Gene
  665828

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000074252	Ensembl Gene Model | MGI Sequence Detail	1633	C57BL/6J
transcript	NM_001357655	RefSeq | MGI Sequence Detail	1723	C57BL/6
polypeptide	NP_001344584	RefSeq | MGI Sequence Detail	164	C57BL/6

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR018816 Splicing factor cactin, central domain

Molecular
Reagents

• All nucleic 3

  cDNA 3

  
  

  Microarray probesets 1

References

• Summaries
  All 12

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;