Speer1c Gene Detail

Summary

• Symbol
  Speer1c
• Name
  spermatogenesis associated glutamate (E)-rich protein 1C
• Synonyms
  Gm5152

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:3643407
  NCBI Gene: 381612
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:10291713-10296610 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 3.70 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  7

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643407	protein coding gene	Chr5:10291709-10298895 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0029259	protein coding gene	Chr5:10613965-10642399 (+)
AKR/J	MGP_AKRJ_G0029208	protein coding gene	Chr5:11297617-11300339 (+)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0028996	protein coding gene	Chr5:11243225-11255313 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0028958	protein coding gene	Chr5:12071878-12096823 (+)
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0029073	protein coding gene	Chr5:10501125-10502857 (+)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0029757	protein coding gene	Chr5:10886176-10888656 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Speer1c
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  APF
• Find Mice (IMSR)
  4 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• UniProt
  1

• Ensembl
  ENSMUSG00000069355 (Evidence)
• NCBI Gene
  381612

Representative Sequences			Length	Strain/Species
genomic	381612	NCBI Gene Model | MGI Sequence Detail	4898	C57BL/6J
polypeptide	L7N200	UniProt | EBI | MGI Sequence Detail	157	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR006907 Disks large homolog 5, N-terminal

Other
Accession IDs

MGI:7531531

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;