Gm6762 Pseudogene Detail

Summary

• Symbol
  Gm6762
• Name
  predicted pseudogene 6762

• Feature Type
  pseudogene
• IDs
  MGI:3643568
  NCBI Gene: 627480
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:35485408-35485696 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 20.32 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643568	pseudogene	Chr9:35484933-35485961 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014131	pseudogene	Chr9:33389556-33389844 (-)
A/J	MGP_AJ_G0014152	pseudogene	Chr9:32520115-32520403 (-)
AKR/J	MGP_AKRJ_G0014073	pseudogene	Chr9:33254663-33254951 (-)
BALB/cJ	MGP_BALBcJ_G0014100	pseudogene	Chr9:32438438-32438726 (-)
C3H/HeJ	MGP_C3HHeJ_G0013932	pseudogene	Chr9:33587966-33588254 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014544	pseudogene	Chr9:34503563-34503851 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012383	pseudogene	Chr9:31206926-31207199 (-)
CAST/EiJ	MGP_CASTEiJ_G0013591	pseudogene	Chr9:33494043-33494331 (-)
CBA/J	MGP_CBAJ_G0013915	pseudogene	Chr9:35660071-35660359 (-)
DBA/2J	MGP_DBA2J_G0013996	pseudogene	Chr9:32503804-32504092 (-)
FVB/NJ	MGP_FVBNJ_G0013995	pseudogene	Chr9:31920983-31921271 (-)
LP/J	MGP_LPJ_G0014080	pseudogene	Chr9:33631958-33632246 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014027	pseudogene	Chr9:37225823-37226111 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014516	pseudogene	Chr9:33201771-33202059 (-)
PWK/PhJ	MGP_PWKPhJ_G0013405	pseudogene	Chr9:32489043-32489443 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013188	pseudogene	Chr9:33352066-33352354 (-)
WSB/EiJ	MGP_WSBEiJ_G0013648	pseudogene	Chr9:32975460-32975748 (-)

Homology

• Gene Tree
  Gm6762
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000086984 (Evidence)
• NCBI Gene
  627480

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086984	Ensembl Gene Model | MGI Sequence Detail	289	C57BL/6J
transcript	ENSMUST00000121769	Ensembl | MGI Sequence Detail	289	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;