Gm8837 Pseudogene Detail

Summary

• Symbol
  Gm8837
• Name
  predicted gene 8837

• Feature Type
  pseudogene
• IDs
  MGI:3643713
  NCBI Gene: 102632952
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:131107907-131109650 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 63.44 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643713	pseudogene	Chr6:131107758-131110400 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040482	pseudogene	Chr6:135034324-135035927 (+)
A/J	MGP_AJ_G0040465	pseudogene	Chr6:129804140-129805878 (+)
AKR/J	MGP_AKRJ_G0040392	pseudogene	Chr6:133563063-133564862 (+)
BALB/cJ	MGP_BALBcJ_G0040470	pseudogene	Chr6:129466243-129467975 (+)
C3H/HeJ	MGP_C3HHeJ_G0040092	pseudogene	Chr6:133634082-133684777 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041091	pseudogene	Chr6:138694493-138697324 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039155	pseudogene	Chr6:133569683-133572230 (+)
CBA/J	MGP_CBAJ_G0040064	pseudogene	Chr6:143967746-143987976 (+)
DBA/2J	MGP_DBA2J_G0040265	pseudogene	Chr6:128688022-128721230 (+)
FVB/NJ	MGP_FVBNJ_G0040212	pseudogene	Chr6:127625281-127627024 (+)
LP/J	MGP_LPJ_G0040308	pseudogene	Chr6:135315590-135375992 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040204	pseudogene	Chr6:147810459-147812124 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041166	pseudogene	Chr6:133450535-133451951 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0039397	pseudogene	Chr6:134020353-134027511 (+)

Homology

• Gene Tree
  Gm8837
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000090099 (Evidence)
• NCBI Gene
  102632952

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090099	Ensembl Gene Model | MGI Sequence Detail	1744	C57BL/6J
transcript	ENSMUST00000161037	Ensembl | MGI Sequence Detail	1107	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;