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Trmt112-ps1 Pseudogene Detail
Summary
  • Symbol
    Trmt112-ps1
  • Name
    tRNA methyltransferase 11-2, pseudogene 1
  • Feature Type
    pseudogene
  • IDs
    MGI:3643840
    NCBI Gene: 665860
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:91885564-91885938 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 45.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    121 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643840
 pseudogene Chr5:91885389-91885972 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0013163
 pseudogene Chr5:89200579-89200953 (-)
AKR/J MGP_AKRJ_G0013129
 pseudogene Chr5:92086627-92092042 (-)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0012989
 pseudogene Chr5:92493941-92494315 (-)
C57BL/6NJ MGP_C57BL6NJ_G0013504
 pseudogene Chr5:96558723-96560088 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0011802
 pseudogene Chr6:2662642-2663012 (+)
CAST/EiJ MGP_CASTEiJ_G0012871
 pseudogene Chr6:3047257-3047628 (+)
CBA/J MGP_CBAJ_G0012961
 pseudogene Chr5:99862259-99862633 (-)
DBA/2J MGP_DBA2J_G0013041
 pseudogene Chr5:89240501-89240875 (-)
FVB/NJ MGP_FVBNJ_G0013044
 pseudogene Chr5:88090318-88090689 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0013062
 pseudogene Chr5:104827948-104828322 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0013507
 pseudogene Chr5:91633804-91634178 (-)
PWK/PhJ MGP_PWKPhJ_G0012684
 pseudogene Chr6:2889496-2889871 (+)
SPRET/EiJ MGP_SPRETEiJ_G0012468
 pseudogene Chr6:3078945-3079316 (+)
WSB/EiJ MGP_WSBEiJ_G0012758
 pseudogene Chr5:92078182-92078556 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving Trmt112-ps1
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    19
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107261 Ensembl Gene Model | MGI Sequence Detail 375 C57BL/6J ±  kb
transcript ENSMUST00000202320 Ensembl | MGI Sequence Detail 375 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 10
    Phenotypes 6
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory