Gm9057 Pseudogene Detail

Summary

• Symbol
  Gm9057
• Name
  predicted gene 9057

• Feature Type
  pseudogene
• IDs
  MGI:3643991
  NCBI Gene: 105247048
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:22768955-22769250 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 10.07 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643991	pseudogene	Chr5:22768777-22769451 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013000	pseudogene	Chr5:20131636-20131931 (+)
A/J	MGP_AJ_G0012987	pseudogene	Chr5:19500608-19500903 (+)
AKR/J	MGP_AKRJ_G0012953	pseudogene	Chr5:20247055-20247369 (+)
BALB/cJ	MGP_BALBcJ_G0012967	pseudogene	Chr5:19935922-19936217 (+)
C3H/HeJ	MGP_C3HHeJ_G0012817	pseudogene	Chr5:20329350-20329645 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013326	pseudogene	Chr5:21591683-21591978 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010153	pseudogene	Chr17:10925450-10925766 (-)
CAST/EiJ	MGP_CASTEiJ_G0012549	pseudogene	Chr5:19639021-19639335 (+)
CBA/J	MGP_CBAJ_G0012786	pseudogene	Chr5:21854001-21854296 (+)
DBA/2J	MGP_DBA2J_G0012862	pseudogene	Chr5:19776564-19776859 (+)
FVB/NJ	MGP_FVBNJ_G0012865	pseudogene	Chr5:19180846-19181141 (+)
LP/J	MGP_LPJ_G0012933	pseudogene	Chr5:20541397-20541692 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012880	pseudogene	Chr5:23092885-23093180 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013326	pseudogene	Chr5:19844401-19844696 (+)
PWK/PhJ	MGP_PWKPhJ_G0012372	pseudogene	Chr5:18818149-18818504 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0012587	pseudogene	Chr5:19943016-19943306 (+)

Homology

• Gene Tree
  Gm9057
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm9057
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000105156 (Evidence)
• NCBI Gene
  105247048

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105156	Ensembl Gene Model | MGI Sequence Detail	296	C57BL/6J
transcript	ENSMUST00000198791	Ensembl | MGI Sequence Detail	296	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17