Gm9005 Pseudogene Detail

Summary

• Symbol
  Gm9005
• Name
  predicted gene 9005

• Feature Type
  pseudogene
• IDs
  MGI:3644003
  NCBI Gene: 101056046
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:93590569-93591175 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 41.57 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  80 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644003	pseudogene	ChrX:93590504-93591348 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014622	pseudogene	ChrX:90970265-90970871 (-)
A/J	MGP_AJ_G0014631	pseudogene	ChrX:91052335-91052941 (-)
AKR/J	MGP_AKRJ_G0014554	pseudogene	ChrX:93460206-93460812 (-)
BALB/cJ	MGP_BALBcJ_G0014579	pseudogene	ChrX:89771566-89772172 (-)
C3H/HeJ	MGP_C3HHeJ_G0014416	pseudogene	ChrX:91325779-91326385 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015062	pseudogene	ChrX:93745619-93746225 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012767	pseudogene	ChrX:89204896-89205494 (-)
CAST/EiJ	MGP_CASTEiJ_G0014041	pseudogene	ChrX:75986861-75987467 (-)
CBA/J	MGP_CBAJ_G0014402	pseudogene	ChrX:96438886-96439492 (-)
DBA/2J	MGP_DBA2J_G0014484	pseudogene	ChrX:90284590-90285196 (-)
FVB/NJ	MGP_FVBNJ_G0014471	pseudogene	ChrX:89689098-89689704 (-)
LP/J	MGP_LPJ_G0014582	pseudogene	ChrX:91778154-91778760 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014510	pseudogene	ChrX:100773254-100773860 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015029	pseudogene	ChrX:90669153-90670815 (-)
PWK/PhJ	MGP_PWKPhJ_G0013848	pseudogene	ChrX:73755037-73755765 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013641	pseudogene	ChrX:76852870-76853476 (-)
WSB/EiJ	MGP_WSBEiJ_G0014119	pseudogene	ChrX:89477147-89477753 (-)

Homology

• Gene Tree
  Gm9005
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081796 (Evidence)
• NCBI Gene
  101056046

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081796	Ensembl Gene Model | MGI Sequence Detail	607	C57BL/6J
transcript	ENSMUST00000119908	Ensembl | MGI Sequence Detail	607	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;