Rps2-ps9 Pseudogene Detail

Summary

• Symbol
  Rps2-ps9
• Name
  ribosomal protein S2, pseudogene 9
• Synonyms
  Gm8235

• Feature Type
  pseudogene
• IDs
  MGI:3644037
  NCBI Gene: 666682
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:28003398-28004220 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 14.59 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  51 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644037	pseudogene	Chr17:28003373-28004259 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011337	pseudogene	Chr17:27112761-27113581 (+)
A/J	MGP_AJ_G0011324	pseudogene	Chr17:26249760-26250576 (+)
AKR/J	MGP_AKRJ_G0011288	pseudogene	Chr17:26426854-26427667 (+)
BALB/cJ	MGP_BALBcJ_G0011299	pseudogene	Chr17:26521267-26522105 (+)
C3H/HeJ	MGP_C3HHeJ_G0011189	pseudogene	Chr17:26796071-26796886 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011590	pseudogene	Chr17:28238557-28239710 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010163	pseudogene	Chr17:23634622-23635443 (+)
CAST/EiJ	MGP_CASTEiJ_G0011009	pseudogene	Chr17:26763873-26764689 (+)
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0011222	pseudogene	Chr17:25811825-25813198 (+)
FVB/NJ	MGP_FVBNJ_G0011222	pseudogene	Chr17:25606316-25607132 (+)
LP/J	MGP_LPJ_G0011304	pseudogene	Chr17:27378934-27380434 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011218	pseudogene	Chr17:28696437-28698418 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011569	pseudogene	Chr17:26832364-26835261 (+)
PWK/PhJ	MGP_PWKPhJ_G0010882	pseudogene	Chr17:24607764-24608704 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0011050	pseudogene	Chr17:26816712-26817528 (+)

Homology

• Gene Tree
  Rps2-ps9
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  2

• Ensembl
  ENSMUSG00000080731 (Evidence)
• NCBI Gene
  666682

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080731	Ensembl Gene Model | MGI Sequence Detail	823	C57BL/6J
transcript	ENSMUST00000121414	Ensembl | MGI Sequence Detail	823	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;