Rpl48-ps1 Pseudogene Detail

Summary

• Symbol
  Rpl48-ps1
• Name
  ribosomal protein L48, pseudogene 1
• Synonyms
  Gm4771

• Feature Type
  pseudogene
• IDs
  MGI:3644204
  NCBI Gene: 211619
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:57477489-57478044 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 29.21 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644204	pseudogene	Chr10:57477349-57478432 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010519	pseudogene	Chr10:56977452-56978007 (+)
A/J	MGP_AJ_G0010513	pseudogene	Chr10:55311316-55311871 (+)
AKR/J	MGP_AKRJ_G0010476	pseudogene	Chr10:56473088-56473643 (+)
BALB/cJ	MGP_BALBcJ_G0010486	pseudogene	Chr10:55426334-55426889 (+)
C3H/HeJ	MGP_C3HHeJ_G0010414	pseudogene	Chr10:56698523-56699078 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010758	pseudogene	Chr10:58754533-58755088 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009426	pseudogene	Chr10:52171123-52171674 (+)
CAST/EiJ	MGP_CASTEiJ_G0010232	pseudogene	Chr10:56641985-56642539 (+)
CBA/J	MGP_CBAJ_G0010380	pseudogene	Chr10:61214702-61215257 (+)
DBA/2J	MGP_DBA2J_G0010413	pseudogene	Chr10:54658801-54659356 (+)
FVB/NJ	MGP_FVBNJ_G0010432	pseudogene	Chr10:53901167-53901722 (+)
LP/J	MGP_LPJ_G0010501	pseudogene	Chr10:57064514-57065069 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010400	pseudogene	Chr10:63430229-63430784 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010727	pseudogene	Chr10:56285888-56286443 (+)
PWK/PhJ	MGP_PWKPhJ_G0010133	pseudogene	Chr10:54446364-54446919 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009947	pseudogene	Chr10:55961544-55962115 (+)
WSB/EiJ	MGP_WSBEiJ_G0010300	pseudogene	Chr10:56491678-56492233 (+)

Homology

• Gene Tree
  Rpl48-ps1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Rpl48-ps1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000093406 (Evidence)
• NCBI Gene
  211619

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093406	Ensembl Gene Model | MGI Sequence Detail	556	C57BL/6J
transcript	ENSMUST00000177147	Ensembl | MGI Sequence Detail	556	Not Applicable

References

• Summaries
  All 10

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87