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Gm5082 Gene Detail
Summary
  • Symbol
    Gm5082
  • Name
    predicted gene 5082
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3644232
    NCBI Gene: 328231
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr13:41802919-41810253 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 20.57 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    289 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644232
 lncRNA gene Chr13:41802919-41810253 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020491
 protein coding gene Chr13:40157772-40158599 (+)
A/J MGP_AJ_G0020445
 protein coding gene Chr13:38820551-38821378 (+)
AKR/J MGP_AKRJ_G0020423
 protein coding gene Chr13:39874905-39875732 (+)
BALB/cJ MGP_BALBcJ_G0020441
 protein coding gene Chr13:39003755-39004582 (+)
C3H/HeJ MGP_C3HHeJ_G0020240
 protein coding gene Chr13:39748237-39749064 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020874
 protein coding gene Chr13:41427256-41428083 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018461
 protein coding gene Chr13:36954503-36955335 (+)
CAST/EiJ MGP_CASTEiJ_G0019755
 protein coding gene Chr13:39552478-39553295 (+)
CBA/J MGP_CBAJ_G0020201
 protein coding gene Chr13:43195691-43196518 (+)
DBA/2J MGP_DBA2J_G0020323
 protein coding gene Chr13:38388402-38389229 (+)
FVB/NJ MGP_FVBNJ_G0020302
 protein coding gene Chr13:37892800-37893627 (+)
LP/J MGP_LPJ_G0020398
 protein coding gene Chr13:40407829-40408656 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020331
 protein coding gene Chr13:43149534-43150361 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020917
 protein coding gene Chr13:39522705-39523532 (+)
PWK/PhJ MGP_PWKPhJ_G0019510
 protein coding gene Chr13:38476124-38476951 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019340
 protein coding gene Chr13:38166395-38167223 (+)
WSB/EiJ MGP_WSBEiJ_G0019817
 protein coding gene Chr13:39831213-39832040 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000054258 Ensembl Gene Model | MGI Sequence Detail 7335 C57BL/6J ±  kb
transcript ENSMUST00000221920 Ensembl | MGI Sequence Detail 1518 Not Applicable  
polypeptide Q8CAZ0 UniProt | EBI | MGI Sequence Detail 138 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 3
    Genomic 1
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 16
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory