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Scgb1b3 Gene Detail
Summary
  • Symbol
    Scgb1b3
  • Name
    secretoglobin, family 1B, member 3
  • Synonyms
    Abpa3, Gm5325
  • Feature Type
    protein coding gene
  • IDs
    MGI:3644233
    NCBI Gene: 384585
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:31075017-31076341 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 19.32 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    161 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644233
 protein coding gene Chr7:31075017-31076341 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0032044
 protein coding gene Chr7:29608068-29609392 (+)
AKR/J MGP_AKRJ_G0031977
 protein coding gene Chr7:30389637-30390961 (+)
BALB/cJ MGP_BALBcJ_G0032051
 protein coding gene Chr7:29804563-29805887 (+)
C3H/HeJ MGP_C3HHeJ_G0031768
 protein coding gene Chr7:30825699-30827023 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032517
 protein coding gene Chr7:31460736-31462060 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0031736
 protein coding gene Chr7:32925599-32926923 (+)
DBA/2J MGP_DBA2J_G0031888
 protein coding gene Chr7:29290788-29292112 (+)
FVB/NJ MGP_FVBNJ_G0031843
 protein coding gene Chr7:29464590-29465914 (+)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0031881
 protein coding gene Chr7:32165300-32168237 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032543
 protein coding gene Chr7:29827581-29828905 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 384585 NCBI Gene Model | MGI Sequence Detail 1325 C57BL/6J ±  kb
transcript NM_001256073 RefSeq | MGI Sequence Detail 419 C57BL/6  
polypeptide NP_001243002 RefSeq | MGI Sequence Detail 93 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR006178 Major allergen I polypeptide chain 1
    IPR016126 Secretoglobin
    IPR053723 Secretoglobin Domain-Containing
    IPR035960 Secretoglobin superfamily
References
more
  • Summaries
    All 11
    Gene Ontology 1
  • Earliest
    J:195039 Emes RD, et al., Comparative evolutionary genomics of androgen-binding protein genes. Genome Res. 2004 Aug;14(8):1516-29
  • Latest
    J:185789 Jackson BC, et al., Update of the human secretoglobin (SCGB) gene superfamily and an example of 'evolutionary bloom' of androgen-binding protein genes within the mouse Scgb gene superfamily. Hum Genomics. 2011 Oct;5(6):691-702
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory