Gm6632 Pseudogene Detail

Summary

• Symbol
  Gm6632
• Name
  predicted pseudogene 6632

• Feature Type
  pseudogene
• IDs
  MGI:3644251
  NCBI Gene: 625870
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:59210942-59211895 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 31.65 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  162 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644251	pseudogene	Chr5:59210942-59211922 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013098	pseudogene	Chr5:58395842-58396795 (+)
A/J	MGP_AJ_G0013085	pseudogene	Chr5:56229571-56230524 (+)
AKR/J	MGP_AKRJ_G0013050	pseudogene	Chr5:58015723-58016676 (+)
BALB/cJ	MGP_BALBcJ_G0013062	pseudogene	Chr5:56850431-56851384 (+)
C3H/HeJ	MGP_C3HHeJ_G0012914	pseudogene	Chr5:58339143-58340096 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013423	pseudogene	Chr5:60811695-60812648 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011612	pseudogene	Chr5:52873962-52874915 (+)
CAST/EiJ	MGP_CASTEiJ_G0012645	pseudogene	Chr5:57346520-57347473 (+)
CBA/J	MGP_CBAJ_G0012881	pseudogene	Chr5:62732718-62733671 (+)
DBA/2J	MGP_DBA2J_G0012959	pseudogene	Chr5:56263898-56264851 (+)
FVB/NJ	MGP_FVBNJ_G0012966	pseudogene	Chr5:55541051-55542004 (+)
LP/J	MGP_LPJ_G0013033	pseudogene	Chr5:58818064-58819017 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012980	pseudogene	Chr5:64821798-64822751 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013425	pseudogene	Chr5:57683516-57684469 (+)
PWK/PhJ	MGP_PWKPhJ_G0012463	pseudogene	Chr5:55308673-55309626 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012264	pseudogene	Chr5:57050513-57051466 (+)
WSB/EiJ	MGP_WSBEiJ_G0012681	pseudogene	Chr5:57838821-57839774 (+)

Homology

• Gene Tree
  Gm6632
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm6632
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000094696 (Evidence)
• NCBI Gene
  625870

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000094696	Ensembl Gene Model | MGI Sequence Detail	954	C57BL/6J
transcript	ENSMUST00000168425	Ensembl | MGI Sequence Detail	954	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17