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Ctag2l1 Gene Detail
Summary
  • Symbol
    Ctag2l1
  • Name
    CTAG2 like 1
  • Synonyms
    Gm6880
  • Feature Type
    protein coding gene
  • IDs
    MGI:3644285
    NCBI Gene: 628456
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:73523893-73525005 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 38.01 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    80 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644285
 protein coding gene ChrX:73523723-73525168 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0035815
 protein coding gene ChrX:69493000-69495644 (-)
C3H/HeJ MGP_C3HHeJ_G0035530
 protein coding gene ChrX:71267709-71268819 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036350
 protein coding gene ChrX:73049882-73050945 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0034816
 protein coding gene ChrX:56628303-56629522 (+)
CBA/J MGP_CBAJ_G0035503
 protein coding gene ChrX:75004293-75005405 (+)
DBA/2J MGP_DBA2J_G0035659
 protein coding gene ChrX:70214335-70215447 (+)
FVB/NJ MGP_FVBNJ_G0035597
 protein coding gene ChrX:69268559-69270539 (-)
LP/J MGP_LPJ_G0035738
 protein coding gene ChrX:71080556-71081668 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0036376
 protein coding gene ChrX:70632828-70634016 (+)
PWK/PhJ MGP_PWKPhJ_G0034512
 protein coding gene ChrX:54618216-54619320 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034348
 protein coding gene ChrX:57261087-57263118 (+)
WSB/EiJ MGP_WSBEiJ_G0034954
 protein coding gene ChrX:69678994-69680608 (-)



Homology
more
  • Human Ortholog
    CTAG1A, cancer/testis antigen 1A
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CTAG1A, cancer/testis antigen 1A
  • Synonyms
    CT6.1, ESO1, LAGE-2, LAGE2A, NY-ESO-1
  • Links
    NCBI Gene ID: 246100
    neXtProt AC: NX_P78358
    UniProt: P78358

  • Chr Location
    chrX:154585133-154586816 (+)  GRCh38
  • Human Ortholog
    CTAG1B, cancer/testis antigen 1B
  • Synonyms
    CT6.1, CTAG, CTAG1, ESO1, LAGE-2, LAGE2B, NY-ESO-1
  • Links
    NCBI Gene ID: 1485
    neXtProt AC: NX_P78358
    UniProt: P78358

  • Chr Location
    Xq28; chrX:154617609-154619282 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000079536 Ensembl Gene Model | MGI Sequence Detail 1113 C57BL/6J ±  kb
transcript ENSMUST00000114125 Ensembl | MGI Sequence Detail 627 Not Applicable  
polypeptide ENSMUSP00000109760 Ensembl | MGI Sequence Detail 208 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR015419 CTAG/Pcc1 family
Other
Accession IDs
less
MGI:6331393
References
more
  • Summaries
    All 10
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:244654 Leduc MS, et al., A major X-linked locus affects kidney function in mice. Mol Genet Genomics. 2012 Dec;287(11-12):845-54
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory