Gm9078 Pseudogene Detail

Summary

• Symbol
  Gm9078
• Name
  predicted gene 9078

• Feature Type
  pseudogene
• IDs
  MGI:3644457
  NCBI Gene: 102632016
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:100105866-100106664 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 43.72 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  7

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644457	pseudogene	ChrX:100103393-100106786 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014657	pseudogene	ChrX:97541264-97542062 (+)
A/J	no annotation
AKR/J	MGP_AKRJ_G0014590	pseudogene	ChrX:100348896-100350769 (+)
BALB/cJ	MGP_BALBcJ_G0014613	pseudogene	ChrX:96307703-96308559 (+)
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0014520	pseudogene	ChrX:96773162-96774156 (+)
FVB/NJ	MGP_FVBNJ_G0014505	pseudogene	ChrX:96163514-96164176 (+)
LP/J	MGP_LPJ_G0014617	pseudogene	ChrX:98508661-98511277 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm9078
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  10

• Ensembl
  ENSMUSG00000081943 (Evidence)
• NCBI Gene
  102632016

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081943	Ensembl Gene Model | MGI Sequence Detail	799	C57BL/6J
transcript	ENSMUST00000119126	Ensembl | MGI Sequence Detail	617	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;