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Gm5334 Pseudogene Detail
Summary
  • Symbol
    Gm5334
  • Name
    predicted pseudogene 5334
  • Feature Type
    pseudogene
  • IDs
    MGI:3644545
    NCBI Gene: 384639
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:68268586-68269305 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 37.73 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    106 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644545
 pseudogene Chr7:68268204-68269757 (+)
129S1/SvImJ MGP_129S1SvImJ_G0039748
 pseudogene Chr7:69948684-69950237 (+)
A/J MGP_AJ_G0039748
 pseudogene Chr7:68477968-68479521 (+)
AKR/J MGP_AKRJ_G0039672
 pseudogene Chr7:69926245-69927798 (+)
BALB/cJ MGP_BALBcJ_G0039716
 pseudogene Chr7:68220793-68222346 (+)
C3H/HeJ MGP_C3HHeJ_G0039378
 pseudogene Chr7:70641028-70642581 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040279
 pseudogene Chr7:72885815-72887368 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0036906
 pseudogene Chr7:71320743-71322286 (+)
CAST/EiJ MGP_CASTEiJ_G0038496
 pseudogene Chr7:61334788-61336341 (+)
CBA/J MGP_CBAJ_G0039350
 pseudogene Chr7:75183725-75185278 (+)
DBA/2J MGP_DBA2J_G0039544
 pseudogene Chr7:67186470-67188023 (+)
FVB/NJ MGP_FVBNJ_G0039502
 pseudogene Chr7:67316249-67317802 (+)
LP/J MGP_LPJ_G0039583
 pseudogene Chr7:71162265-71163818 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0039503
 pseudogene Chr7:75371387-75372940 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0040381
 pseudogene Chr7:69324351-69325904 (+)
PWK/PhJ MGP_PWKPhJ_G0038172
 pseudogene Chr7:60254011-60255564 (+)
SPRET/EiJ MGP_SPRETEiJ_G0037919
 pseudogene Chr7:56350415-56351968 (+)
WSB/EiJ MGP_WSBEiJ_G0038731
 pseudogene Chr7:69650154-69651707 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm5334
  • Find Mice (IMSR)
    2 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000094854 Ensembl Gene Model | MGI Sequence Detail 720 C57BL/6J ±  kb
transcript ENSMUST00000187472 Ensembl | MGI Sequence Detail 720 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 15
    Phenotypes 9
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory