Gm10048 Gene Detail

Summary

• Symbol
  Gm10048
• Name
  predicted gene 10048
• Synonyms
  EG625026

• Feature Type
  unclassified gene
• IDs
  MGI:3644560
  NCBI Gene: 625026
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:49082296-49086082 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 26.53 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  261 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644560	unclassified gene	Chr5:49082296-49086082 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0001502	unclassified gene	Chr5:47757234-47761026 (-)
A/J	MGP_AJ_G0001483	unclassified gene	Chr5:46087996-46091782 (-)
AKR/J	MGP_AKRJ_G0001469	unclassified gene	Chr5:47668546-47672302 (-)
BALB/cJ	MGP_BALBcJ_G0001479	unclassified gene	Chr5:46592262-46596048 (-)
C3H/HeJ	MGP_C3HHeJ_G0001456	unclassified gene	Chr5:47826964-47831152 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0001597	unclassified gene	Chr5:49849261-49853072 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001288	unclassified gene	Chr5:43022913-43027016 (-)
CAST/EiJ	MGP_CASTEiJ_G0001432	unclassified gene	Chr5:46804743-46808527 (-)
CBA/J	MGP_CBAJ_G0001447	unclassified gene	Chr5:51305118-51308896 (-)
DBA/2J	MGP_DBA2J_G0001452	unclassified gene	Chr5:46168345-46172097 (-)
FVB/NJ	MGP_FVBNJ_G0001460	unclassified gene	Chr5:45545957-45549764 (-)
LP/J	MGP_LPJ_G0001507	unclassified gene	Chr5:48209577-48216252 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001446	unclassified gene	Chr5:52352398-52352771 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001585	unclassified gene	Chr5:47218841-47222617 (-)
PWK/PhJ	MGP_PWKPhJ_G0001389	unclassified gene	Chr5:45241631-45245694 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001358	unclassified gene	Chr5:46589385-46593184 (-)
WSB/EiJ	MGP_WSBEiJ_G0001448	unclassified gene	Chr5:47265699-47269449 (-)

Homology

• Gene Tree
  Gm10048
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  14 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  2
• Genomic Mutations
  2 involving Gm10048
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000103544 (Evidence)
• NCBI Gene
  625026

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103544	Ensembl Gene Model | MGI Sequence Detail	3787	C57BL/6J
transcript	NR_188766	RefSeq | MGI Sequence Detail	13285	C57BL/6
polypeptide	Q8CB48	UniProt | EBI | MGI Sequence Detail	126	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 22

  Diseases 1

  Phenotypes 14
• Earliest
  J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
• Latest
  J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707