Gm8754 Pseudogene Detail

Summary

• Symbol
  Gm8754
• Name
  predicted gene 8754

• Feature Type
  pseudogene
• IDs
  MGI:3644783
  NCBI Gene: 667672
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:77434311-77434830 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 38.34 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  157 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644783	pseudogene	ChrX:77434249-77434945 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014540	pseudogene	ChrX:74262338-74262857 (+)
A/J	MGP_AJ_G0014551	pseudogene	ChrX:74535609-74536128 (+)
AKR/J	MGP_AKRJ_G0014476	pseudogene	ChrX:76472244-76479883 (+)
BALB/cJ	MGP_BALBcJ_G0014503	pseudogene	ChrX:73451875-73452394 (+)
C3H/HeJ	MGP_C3HHeJ_G0014337	pseudogene	ChrX:74690127-74690646 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0014322	pseudogene	ChrX:78607959-78608478 (+)
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0014392	pseudogene	ChrX:73190214-73193593 (+)
LP/J	MGP_LPJ_G0014499	pseudogene	ChrX:75114267-75114786 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014435	pseudogene	ChrX:81389085-81389574 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014945	pseudogene	ChrX:74069017-74069645 (+)
PWK/PhJ	MGP_PWKPhJ_G0013769	pseudogene	ChrX:58022140-58022767 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013570	pseudogene	ChrX:60843728-60851283 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm8754
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  2

• Ensembl
  ENSMUSG00000084019 (Evidence)
• NCBI Gene
  667672

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084019	Ensembl Gene Model | MGI Sequence Detail	520	C57BL/6J
transcript	ENSMUST00000118391	Ensembl | MGI Sequence Detail	520	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;