Nsa2-ps2 Pseudogene Detail

Summary

• Symbol
  Nsa2-ps2
• Name
  NSA2 ribosome biogenesis homolog, pseudogene 2

• Feature Type
  pseudogene
• IDs
  MGI:3644985
  NCBI Gene: 666180
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:135229048-135229820 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 57.91 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644985	pseudogene	ChrX:135228925-135230017 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011166	pseudogene	Chr15:10713317-10714135 (+)
A/J	MGP_AJ_G0011159	pseudogene	Chr15:10412250-10413028 (+)
AKR/J	MGP_AKRJ_G0011119	pseudogene	Chr15:10694203-10695911 (+)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0011025	pseudogene	Chr15:10640025-10640807 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015269	pseudogene	ChrX:137538972-137542957 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010007	pseudogene	Chr15:9897871-9899544 (+)
CAST/EiJ	MGP_CASTEiJ_G0010849	pseudogene	Chr15:10754882-10755621 (+)
CBA/J	MGP_CBAJ_G0011005	pseudogene	Chr15:11449032-11452023 (+)
DBA/2J	MGP_DBA2J_G0011052	pseudogene	Chr15:10250568-10251756 (+)
FVB/NJ	MGP_FVBNJ_G0011054	pseudogene	Chr15:10106526-10107451 (+)
LP/J	MGP_LPJ_G0011142	pseudogene	Chr15:10663275-10664057 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011047	pseudogene	Chr15:11645448-11647174 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015249	pseudogene	ChrX:133053637-133054532 (+)
PWK/PhJ	MGP_PWKPhJ_G0010722	pseudogene	Chr15:10446329-10447111 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010543	pseudogene	Chr15:10629332-10630141 (+)
WSB/EiJ	MGP_WSBEiJ_G0010894	pseudogene	Chr15:10665036-10666779 (+)

Homology

• Gene Tree
  Nsa2-ps2
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000083470 (Evidence)
• NCBI Gene
  666180

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083470	Ensembl Gene Model | MGI Sequence Detail	773	C57BL/6J
transcript	ENSMUST00000120785	Ensembl | MGI Sequence Detail	773	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;