Gm8522 Pseudogene Detail

Summary

• Symbol
  Gm8522
• Name
  predicted gene 8522

• Feature Type
  pseudogene
• IDs
  MGI:3645035
  NCBI Gene: 667218
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:74314616-74316544 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 38.19 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  92 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645035	pseudogene	ChrX:74314486-74316585 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014523	pseudogene	ChrX:71109892-71111820 (-)
A/J	MGP_AJ_G0014533	pseudogene	ChrX:71317171-71319099 (-)
AKR/J	MGP_AKRJ_G0014460	pseudogene	ChrX:73190332-73192260 (-)
BALB/cJ	MGP_BALBcJ_G0014486	pseudogene	ChrX:70332910-70334838 (-)
C3H/HeJ	MGP_C3HHeJ_G0014319	pseudogene	ChrX:71598150-71600078 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014956	pseudogene	ChrX:73402146-73404074 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012706	pseudogene	ChrX:70741130-70743087 (-)
CAST/EiJ	MGP_CASTEiJ_G0013951	pseudogene	ChrX:56931024-56932950 (-)
CBA/J	MGP_CBAJ_G0014304	pseudogene	ChrX:75360042-75361970 (-)
DBA/2J	MGP_DBA2J_G0014386	pseudogene	ChrX:70792115-70794043 (-)
FVB/NJ	MGP_FVBNJ_G0014376	pseudogene	ChrX:70110806-70112734 (-)
LP/J	MGP_LPJ_G0014481	pseudogene	ChrX:71912945-71914873 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014417	pseudogene	ChrX:77956828-77958756 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014928	pseudogene	ChrX:70978833-70980761 (-)
PWK/PhJ	MGP_PWKPhJ_G0013755	pseudogene	ChrX:54941114-54943040 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013557	pseudogene	ChrX:57761087-57762998 (-)
WSB/EiJ	MGP_WSBEiJ_G0014025	pseudogene	ChrX:70201752-70203680 (-)

Homology

• Gene Tree
  Gm8522
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081633 (Evidence)
• NCBI Gene
  667218

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081633	Ensembl Gene Model | MGI Sequence Detail	1929	C57BL/6J
transcript	ENSMUST00000118416	Ensembl | MGI Sequence Detail	1929	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm8522:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr163660	ChrX:74316562-74316578 (-)	-26 bp